Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq1087 91.5 1e-12
seq503 86.0 5e-11
>seq1087
Length=225685
Score = 91.5 bits (100), Expect = 1e-12
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 432291 AAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGTACA 432350
|| ||||| ||| | ||||||||||||||||| ||||| || || | ||||||||||||
Sbjct 21079 AAGGAAGGGCGTCTCAGAGGAAATTTGATGGGCAAGCGCGTAGACTTCTCTGCACGTACA 21020
Query 432351 GTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCT 432398
|| || || ||| ||||| ||| |||| || | |||||||| |||
Sbjct 21019 GTCATCACAGGTGACCCTAACCTTGATCTCGATCAGGTTGGTGTCCCT 20972
>seq503
Length=216222
Score = 86.0 bits (94), Expect = 5e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 282341 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 282400
||||| || |||| ||||| || ||||| || ||||| || | | ||||| ||||||
Sbjct 2 AGACCGTAGGCAATGGCAGCGGCGGTTGGCTCGTTAATGATGCGGAGCACATTCAGACCA 61
Query 282401 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 282460
||||| || || || || || |||||||| || || || || || ||||||||||||
Sbjct 62 GCAATGAGACCAGCGTCCTTGGTTGCTTGTCTCTGCGAGTCATTGAAGTATGCAGGAACA 121
Query 282461 GT 282462
||
Sbjct 122 GT 123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740530882866102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |