Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq1032 98.7 1e-15
>seq1032
Length=45607
Score = 98.7 bits (108), Expect = 1e-15
Identities = 332/511 (65%), Gaps = 7/511 (1%)
Strand=Plus/Minus
Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256
||||||| |||| ||||| || || | || | ||||| || |||||| | |||||
Sbjct 29037 TCAACGCCATCGACAATATCCCTTGCATCCGCAGAAAGGCGGACTGGGCACTCCGATGGA 28978
Query 50257 CTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTG 50316
| |||| | || || ||| || | | || || || ||||||||||
Sbjct 28977 TCAGCGACAAGAGCTCGACCTTCGCCATGCGACTGATTGCCTTCGCTGCAGTTGAAGGTA 28918
Query 50317 TGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCCC 50375
| || || ||||| ||||||| |||| || | | || || | | | | | |||||
Sbjct 28917 TCTTCTTCTCCGGATCCTTTGCATCCATCTTCTGGCTGAAGAAGCGTGGTC-TCATGCCT 28859
Query 50376 GGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCG 50435
|| |||||||| ||||||| | || |||||||||||||| |||||||| ||||| |||
Sbjct 28858 GGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAAGGCATGCACACCGACTTCGCG 28799
Query 50436 TGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATG 50495
|| || | | | | | | || | || ||| | | | | |||
Sbjct 28798 TGCCTGCTGTTC---TCTCACCTGAAGAACAAGCCCTCAAAGGCTGTCGTACAGAGCATC 28742
Query 50496 TTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTG 50555
|| || ||||| | ||||| | ||||| | || ||||| | ||| ||| |
Sbjct 28741 ATCGTCGAGGCCGTTGCGATCGAGCAGGAGTTCCTGACAGACGCCCTCCCCTGCGCACTC 28682
Query 50556 TTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTG 50615
| ||||||||||| | | |||||| |||||||||| ||||| || ||| | || |
Sbjct 28681 CTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAATTTGTGGCCGACCGTCTGCTC 28622
Query 50616 TTGCAGCTGGGACAACC-GAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAA 50674
|| ||| || ||||| ||| | ||| || || ||||| || || ||| | ||
Sbjct 28621 CTGGCGCTCGG-CAACCAGAAGTTCTACAACGCCACCAACCCGTTCGACTTCATGGAGAA 28563
Query 50675 CATATCGTTGGAGGGCAAAACAAACTTTTTC 50705
|| ||| ||| ||||| || ||||| |||
Sbjct 28562 TATCTCGCTGGGTGGCAAGACCAACTTCTTC 28532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488531621516400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |