Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1032 98.7 1e-15 >seq1032 Length=45607 Score = 98.7 bits (108), Expect = 1e-15 Identities = 332/511 (65%), Gaps = 7/511 (1%) Strand=Plus/Minus Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256 ||||||| |||| ||||| || || | || | ||||| || |||||| | ||||| Sbjct 29037 TCAACGCCATCGACAATATCCCTTGCATCCGCAGAAAGGCGGACTGGGCACTCCGATGGA 28978 Query 50257 CTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTG 50316 | |||| | || || ||| || | | || || || |||||||||| Sbjct 28977 TCAGCGACAAGAGCTCGACCTTCGCCATGCGACTGATTGCCTTCGCTGCAGTTGAAGGTA 28918 Query 50317 TGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCCC 50375 | || || ||||| ||||||| |||| || | | || || | | | | | ||||| Sbjct 28917 TCTTCTTCTCCGGATCCTTTGCATCCATCTTCTGGCTGAAGAAGCGTGGTC-TCATGCCT 28859 Query 50376 GGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCG 50435 || |||||||| ||||||| | || |||||||||||||| |||||||| ||||| ||| Sbjct 28858 GGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAAGGCATGCACACCGACTTCGCG 28799 Query 50436 TGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATG 50495 || || | | | | | | || | || ||| | | | | ||| Sbjct 28798 TGCCTGCTGTTC---TCTCACCTGAAGAACAAGCCCTCAAAGGCTGTCGTACAGAGCATC 28742 Query 50496 TTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTG 50555 || || ||||| | ||||| | ||||| | || ||||| | ||| ||| | Sbjct 28741 ATCGTCGAGGCCGTTGCGATCGAGCAGGAGTTCCTGACAGACGCCCTCCCCTGCGCACTC 28682 Query 50556 TTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTG 50615 | ||||||||||| | | |||||| |||||||||| ||||| || ||| | || | Sbjct 28681 CTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAATTTGTGGCCGACCGTCTGCTC 28622 Query 50616 TTGCAGCTGGGACAACC-GAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAA 50674 || ||| || ||||| ||| | ||| || || ||||| || || ||| | || Sbjct 28621 CTGGCGCTCGG-CAACCAGAAGTTCTACAACGCCACCAACCCGTTCGACTTCATGGAGAA 28563 Query 50675 CATATCGTTGGAGGGCAAAACAAACTTTTTC 50705 || ||| ||| ||||| || ||||| ||| Sbjct 28562 TATCTCGCTGGGTGGCAAGACCAACTTCTTC 28532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488531621516400