Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1917 109 1e-18 >seq1917 Length=9250 Score = 109 bits (120), Expect = 1e-18 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | |||||||| || ||||||||||| || ||||| || || || || || Sbjct 8948 CCACCACGCAAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGAC 9007 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | ||| ||||| | || || || || || || || | || || || || || Sbjct 9008 AAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGG 9067 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGG-TTCTA 82761 ||||| ||||| ||||||||| ||||| || ||||| || ||||| || | ||| ||| | Sbjct 9068 ATTCCCTCCTTGTCTTGAATC-TTGCTCTTCACATTGTCGATCGTGTC-TGAGGATTCCA 9125 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAAT 82802 |||| | || |||||||| ||||| | ||||| || ||| Sbjct 9126 CTTCTAGCGTAATCGTCTTTCCTGTGAGTGTCTTGACGAAT 9166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981801701027153