Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq721 206 3e-48 seq1032 156 4e-33 >seq721 Length=104476 Score = 206 bits (228), Expect = 3e-48 Identities = 985/1541 (64%), Gaps = 41/1541 (3%) Strand=Plus/Minus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| || ||||| || ||||| || ||| ||| | ||||| || ||||| Sbjct 61184 TTGACTACCTGGAATTCGCCAGCAAGCACACGTCGCGAATAGATATTGCTGGTGTACGGT 61125 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 ||||| |||||||| ||||| ||||| | || | ||| || ||||| || || Sbjct 61124 TCAAAGCACTCGTTGAAGCCCATGATCTGTGAAGTGGATGCGGTAGGCATAGGAGCAACG 61065 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439 |||| ||||| |||| ||| | | || ||| ||||| | |||| ||||| Sbjct 61064 AGCAAAGAGTTTCGCACACCATGCTCAGCAATCTTGGCCTTCAATGAGTCCCAATCCCAA 61005 Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCT 148498 || ||||| || ||| |||||| |||||||| || ||| | || | || Sbjct 61004 AGATCTGACGGGGTAACGCCCCACATATCGTACTGAAGCTCGCC-CTTTGAGACTGGAGA 60946 Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558 || || || | ||| || || || | ||||| || || || || || Sbjct 60945 ACCTTCATAGGTCTCGTAAGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAGC 60886 Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGC---CGACTCGCT 148612 | | ||| || |||||| || || |||| ||| | ||| | ||||||| Sbjct 60885 AGCATGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCGAA 60826 Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672 | |||||||| || | || || || ||||| || || || | || || Sbjct 60825 T------GGCATACGAAGAGCAAGGAAGGCATCAGCAAGACCGCTAACACCAAGACCGAT 60772 Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGA 148731 ||||| ||| |||||| || |||| | | |||||||||||| |||| Sbjct 60771 GGGCCTGTGGCGCATGTTGCTCTTCTTGGC-CTCTGGCACTGGATAGTGGTTGACCTCGA 60713 Query 148732 TGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGT 148791 ||||||||| ||||| ||||||| || ||||| | || || Sbjct 60712 TGATCTTGTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGGAAGTCAA 60653 Query 148792 ACTTGTCATCTACGATG----CATCGGTT--CACGGCGATAGAGGCTAGATTGCACACGG 148845 |||| || | ||| | ||| |||| || || | ||| || |||||||| |||| Sbjct 60652 ACTTCTCGTTCTCGAGGTCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGG 60593 Query 148846 CCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCA 148905 | ||||| || || ||||||| | |||||| | ||||| ||| || |||||| Sbjct 60592 CGACTTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCG 60533 Query 148906 CGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTC 148965 || | ||||| || |||||||||| |||| || |||||||| || ||| | |||| Sbjct 60532 TTCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTC 60473 Query 148966 CGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCAGGTC--CTGCGCGCGCACTTG 149023 ||||||| ||| ||| | ||||| ||| | ||| || ||| || ||||| Sbjct 60472 CGCCAGTCTCCGTCTGGGCTTCCAGAATG--GCATACCAGATCTTCTGAGCACGCACAGT 60415 Query 149024 CTGCTCGT-AGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGT 149082 || | ||| ||||| || | |||||| ||| || ||| |||||| | || |||| Sbjct 60414 CT-CGCGTCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGT 60356 Query 149083 AGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGT 149142 | ||| | |||||||| |||| || |||||||| || | ||| || ||| | | Sbjct 60355 ACACATCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTT 60296 Query 149143 ACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGC 149202 ||| |||||||| ||||||||||| | ||| || ||| | | |||||||| || Sbjct 60295 CCACACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAA 60236 Query 149203 AGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GCACGCTGAAT-ATGTCCGCGTGCCA 149260 ||||| || ||| ||| || | | | | | ||| | || |||||||| Sbjct 60235 CTTCTTCCTTTCCGTGGTTCTTGCGTAGATCCATGAAAG--AAATGACATCGGCGTGCCA 60178 Query 149261 CGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCG 149317 ||||| | || | || | ||||| ||| ||||| || || ||||| | || Sbjct 60177 TGGCTCGAGATAAATGGCAAAAGCGCCAGGACGCTTGTTGCCACCTTGATCGACATAACG 60118 Query 149318 CACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT-AG 149376 | ||||||| | || |||| ||| || | ||| ||| |||||||| || Sbjct 60117 AGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCC 60058 Query 149377 AGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGT 149436 ||| |||| ||| || || | |||||| ||||| ||||| || || | | Sbjct 60057 AGC-AATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCGATACCACCAGCAT 59999 Query 149437 ACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCT 149496 ||||||||| ||||| || || ||| || ||||| ||||||||| | Sbjct 59998 TCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTT 59939 Query 149497 TCATGGTCAGCAGAAAGCACG-AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACA-T 149554 ||||| | || ||||| | ||| | | || | |||| || || ||||| | Sbjct 59938 TCATGTCGATGAGGAAGCAAGAAGCCAACTGGCCG-TTCGGCGTACCAGCGCTGAACAGT 59880 Query 149555 GGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCG 149614 | ||| | | |||||||| || || || | ||| | ||| | ||||| || Sbjct 59879 GTTGGTGAT-GCGTGTGTGAAGTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGC 59821 Query 149615 GTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTC 149674 || || || || || || || || | || || ||||| | ||| |||||||||| ||| Sbjct 59820 CTCGATATCGTCTCCGTGAATTCCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTC 59761 Query 149675 CGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTA 149734 || || ||| | || ||||| ||| | ||||| || ||| |||||||||| Sbjct 59760 GGCGACCTTGCCATCGATCCGGAGCAGGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTA 59701 Query 149735 CTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775 | ||||| || || | | ||| | ||||||| | || || Sbjct 59700 TTGGTAGTTGAAATCTCTGTCGTAGACAATGGCAGAGTTGA 59660 >seq1032 Length=45607 Score = 156 bits (172), Expect = 4e-33 Identities = 365/544 (67%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAG---TTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 ||| || || ||||| ||||| || ||| || || ||||| ||| ||| || || | Sbjct 28508 GTAGTCTCCAACGCGCTTCTCGAAGAAGAAGTTGGTCTTGCCACCCAGCGAGATATTCTC 28567 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || |||||||||||| | ||||| || | ||| | | ||| | | | |||||| Sbjct 28568 CATGAAGTCGAACGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAGCGCCAGGAGCAG 28627 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || ||||| |||||||||| ||||||| || ||||||||||| || | | Sbjct 28628 ACGGTCGGCCACAAATTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGGAGTG- 28686 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG- 120588 | | || | | || | || | ||||||| ||| || | || ||||| || ||| Sbjct 28687 CGCAGGGGAGGGCGTCTGTCAGGAACTCCTGCTCGATCGCAACGGCCTCGACGATGATGC 28746 Query 120589 -----GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643 ||| || | || |||| | || | | | || | | | | ||||| Sbjct 28747 TCTGTACGA-CAGCCTTTG--AGGGCTTGTTCT-TCAGGTGAGAGAACAG-----CAGGC 28797 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 |||| ||||| ||||||| ||| ||||||||||| || ||||||||| ||||| || | Sbjct 28798 ACGCGAAGTCGGTGTGCATGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGAC 28857 Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763 | ||||||| || | |||| | |||| |||| |||||| || || ||||| | Sbjct 28858 CAGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGA 28917 Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823 || || || || ||||| | || ||| ||| || |||| ||||| | || Sbjct 28918 TACCTTCAACTGCAGCGAAGGCAATCAGTCGCATGGCGAAGGTCGAGCTCTTGTCGCTGA 28977 Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCA 120883 |||| | ||||| || |||||| |||| | ||| || || |||| ||||| | Sbjct 28978 TCCATCGGAGTGCCCAGTCCGCCTTTCTGCGGATGCAAGGGATATTGTCGATGGCGTTGA 29037 Query 120884 GCAG 120887 ||| Sbjct 29038 ACAG 29041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483408551325480