Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq721 206 3e-48
seq1032 156 4e-33
>seq721
Length=104476
Score = 206 bits (228), Expect = 3e-48
Identities = 985/1541 (64%), Gaps = 41/1541 (3%)
Strand=Plus/Minus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| || ||||| || ||||| || ||| ||| | ||||| || |||||
Sbjct 61184 TTGACTACCTGGAATTCGCCAGCAAGCACACGTCGCGAATAGATATTGCTGGTGTACGGT 61125
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
||||| |||||||| ||||| ||||| | || | ||| || ||||| || ||
Sbjct 61124 TCAAAGCACTCGTTGAAGCCCATGATCTGTGAAGTGGATGCGGTAGGCATAGGAGCAACG 61065
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439
|||| ||||| |||| ||| | | || ||| ||||| | |||| |||||
Sbjct 61064 AGCAAAGAGTTTCGCACACCATGCTCAGCAATCTTGGCCTTCAATGAGTCCCAATCCCAA 61005
Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCT 148498
|| ||||| || ||| |||||| |||||||| || ||| | || | ||
Sbjct 61004 AGATCTGACGGGGTAACGCCCCACATATCGTACTGAAGCTCGCC-CTTTGAGACTGGAGA 60946
Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558
|| || || | ||| || || || | ||||| || || || || ||
Sbjct 60945 ACCTTCATAGGTCTCGTAAGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAGC 60886
Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGC---CGACTCGCT 148612
| | ||| || |||||| || || |||| ||| | ||| | |||||||
Sbjct 60885 AGCATGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCGAA 60826
Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672
| |||||||| || | || || || ||||| || || || | || ||
Sbjct 60825 T------GGCATACGAAGAGCAAGGAAGGCATCAGCAAGACCGCTAACACCAAGACCGAT 60772
Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGA 148731
||||| ||| |||||| || |||| | | |||||||||||| ||||
Sbjct 60771 GGGCCTGTGGCGCATGTTGCTCTTCTTGGC-CTCTGGCACTGGATAGTGGTTGACCTCGA 60713
Query 148732 TGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGT 148791
||||||||| ||||| ||||||| || ||||| | || ||
Sbjct 60712 TGATCTTGTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGGAAGTCAA 60653
Query 148792 ACTTGTCATCTACGATG----CATCGGTT--CACGGCGATAGAGGCTAGATTGCACACGG 148845
|||| || | ||| | ||| |||| || || | ||| || |||||||| ||||
Sbjct 60652 ACTTCTCGTTCTCGAGGTCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGG 60593
Query 148846 CCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCA 148905
| ||||| || || ||||||| | |||||| | ||||| ||| || ||||||
Sbjct 60592 CGACTTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCG 60533
Query 148906 CGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTC 148965
|| | ||||| || |||||||||| |||| || |||||||| || ||| | ||||
Sbjct 60532 TTCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTC 60473
Query 148966 CGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCAGGTC--CTGCGCGCGCACTTG 149023
||||||| ||| ||| | ||||| ||| | ||| || ||| || |||||
Sbjct 60472 CGCCAGTCTCCGTCTGGGCTTCCAGAATG--GCATACCAGATCTTCTGAGCACGCACAGT 60415
Query 149024 CTGCTCGT-AGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGT 149082
|| | ||| ||||| || | |||||| ||| || ||| |||||| | || ||||
Sbjct 60414 CT-CGCGTCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGT 60356
Query 149083 AGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGT 149142
| ||| | |||||||| |||| || |||||||| || | ||| || ||| | |
Sbjct 60355 ACACATCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTT 60296
Query 149143 ACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGC 149202
||| |||||||| ||||||||||| | ||| || ||| | | |||||||| ||
Sbjct 60295 CCACACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGCGCGAA 60236
Query 149203 AGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GCACGCTGAAT-ATGTCCGCGTGCCA 149260
||||| || ||| ||| || | | | | | ||| | || ||||||||
Sbjct 60235 CTTCTTCCTTTCCGTGGTTCTTGCGTAGATCCATGAAAG--AAATGACATCGGCGTGCCA 60178
Query 149261 CGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCG 149317
||||| | || | || | ||||| ||| ||||| || || ||||| | ||
Sbjct 60177 TGGCTCGAGATAAATGGCAAAAGCGCCAGGACGCTTGTTGCCACCTTGATCGACATAACG 60118
Query 149318 CACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT-AG 149376
| ||||||| | || |||| ||| || | ||| ||| |||||||| ||
Sbjct 60117 AGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCC 60058
Query 149377 AGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGT 149436
||| |||| ||| || || | |||||| ||||| ||||| || || | |
Sbjct 60057 AGC-AATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCGATACCACCAGCAT 59999
Query 149437 ACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCT 149496
||||||||| ||||| || || ||| || ||||| ||||||||| |
Sbjct 59998 TCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTT 59939
Query 149497 TCATGGTCAGCAGAAAGCACG-AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACA-T 149554
||||| | || ||||| | ||| | | || | |||| || || ||||| |
Sbjct 59938 TCATGTCGATGAGGAAGCAAGAAGCCAACTGGCCG-TTCGGCGTACCAGCGCTGAACAGT 59880
Query 149555 GGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCG 149614
| ||| | | |||||||| || || || | ||| | ||| | ||||| ||
Sbjct 59879 GTTGGTGAT-GCGTGTGTGAAGTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGC 59821
Query 149615 GTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTC 149674
|| || || || || || || || | || || ||||| | ||| |||||||||| |||
Sbjct 59820 CTCGATATCGTCTCCGTGAATTCCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTC 59761
Query 149675 CGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTA 149734
|| || ||| | || ||||| ||| | ||||| || ||| ||||||||||
Sbjct 59760 GGCGACCTTGCCATCGATCCGGAGCAGGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTA 59701
Query 149735 CTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775
| ||||| || || | | ||| | ||||||| | || ||
Sbjct 59700 TTGGTAGTTGAAATCTCTGTCGTAGACAATGGCAGAGTTGA 59660
>seq1032
Length=45607
Score = 156 bits (172), Expect = 4e-33
Identities = 365/544 (67%), Gaps = 20/544 (4%)
Strand=Plus/Plus
Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAG---TTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
||| || || ||||| ||||| || ||| || || ||||| ||| ||| || || |
Sbjct 28508 GTAGTCTCCAACGCGCTTCTCGAAGAAGAAGTTGGTCTTGCCACCCAGCGAGATATTCTC 28567
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || |||||||||||| | ||||| || | ||| | | ||| | | | ||||||
Sbjct 28568 CATGAAGTCGAACGGGTTGGTGGCGTTGTAGAACTTCTGGTTGCCGAGCGCCAGGAGCAG 28627
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || ||||| |||||||||| ||||||| || ||||||||||| || | |
Sbjct 28628 ACGGTCGGCCACAAATTCAATGTACTGGCACATGAGCTTAGCGTTCATGCCGAGGAGTG- 28686
Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG- 120588
| | || | | || | || | ||||||| ||| || | || ||||| || |||
Sbjct 28687 CGCAGGGGAGGGCGTCTGTCAGGAACTCCTGCTCGATCGCAACGGCCTCGACGATGATGC 28746
Query 120589 -----GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643
||| || | || |||| | || | | | || | | | | |||||
Sbjct 28747 TCTGTACGA-CAGCCTTTG--AGGGCTTGTTCT-TCAGGTGAGAGAACAG-----CAGGC 28797
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
|||| ||||| ||||||| ||| ||||||||||| || ||||||||| ||||| || |
Sbjct 28798 ACGCGAAGTCGGTGTGCATGCCTTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGAC 28857
Query 120704 CGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACA 120763
| ||||||| || | |||| | |||| |||| |||||| || || ||||| |
Sbjct 28858 CAGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGATGCAAAGGATCCGGAGAAGAAGA 28917
Query 120764 CGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGA 120823
|| || || || ||||| | || ||| ||| || |||| ||||| | ||
Sbjct 28918 TACCTTCAACTGCAGCGAAGGCAATCAGTCGCATGGCGAAGGTCGAGCTCTTGTCGCTGA 28977
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCA 120883
|||| | ||||| || |||||| |||| | ||| || || |||| ||||| |
Sbjct 28978 TCCATCGGAGTGCCCAGTCCGCCTTTCTGCGGATGCAAGGGATATTGTCGATGGCGTTGA 29037
Query 120884 GCAG 120887
|||
Sbjct 29038 ACAG 29041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483408551325480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |