Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq721 91.5 3e-13
>seq721
Length=104476
Score = 91.5 bits (100), Expect = 3e-13
Identities = 309/478 (65%), Gaps = 5/478 (1%)
Strand=Plus/Plus
Query 110508 GGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTAT 110567
|| || |||||||||||||| || | | || || || || ||||| || |||||
Sbjct 59905 GGCCAGTTGGCTTCTTGCTTCCTCATCGACATGAAAGACGACAGCATTGAGGGAATTTAC 59964
Query 110568 GATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTT 110627
||| | || ||| ||| | || || || || |||| || || ||| | || |
Sbjct 59965 GATACACTGAAAATTTGCGCTATGATCTCAAAGAATGCTGGTGGTATCGGTCTCAACTGT 60024
Query 110628 CATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTT 110687
|| | ||||| | | ||| | | || || |||| || | || | || ||
Sbjct 60025 CACAAAATTCGTGCCACCGGATCCTACATTGCTGGCACGAACGGCACATCCAACGGCCTG 60084
Query 110688 GTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAG 110744
|||| ||| | | |||| |||| |||| || ||||| |||||||||| |||
Sbjct 60085 ATTCCCATGCTTCGTGTCTACAACAACACAGCTCGTTATGTCGATCAAGGTGGCAACAAG 60144
Query 110745 AGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTA 110804
| |||| | ||||| || |||||||| || ||||| | ||| | || ||| |
Sbjct 60145 CGTCCTGGCGCTTTTGCCATTTATCTCGAGCCATGGCACGCCGATGTCATTTCTTTCATG 60204
Query 110805 GAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATG 110864
|| || || || || || ||| |||||| | || || || | || | || ||
Sbjct 60205 GATCTACGCAAGAACCACGGAAAGGAAGAAGTTCGCGCTCGCGACCTGTTCTTCGCCCTG 60264
Query 110865 TGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGT 110924
||||| | ||| | |||||||| ||||| || | || | | ||| | || |||||
Sbjct 60265 TGGATCCCCGATCTGTTCATGAAGCGTGTGGAACAGAACGCCGAATGGACCCTGATGTG- 60323
Query 110925 CCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTAC 110981
|| || || | ||| ||||| ||||||| || || | || || || || ||||||
Sbjct 60324 CCCCAACGAGTGTCCCGGTCTTGCTGATGTGTACGGTGACGAATTCGAGGAGCTTTAC 60381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186781977358947
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |