Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq721 91.5 3e-13 >seq721 Length=104476 Score = 91.5 bits (100), Expect = 3e-13 Identities = 309/478 (65%), Gaps = 5/478 (1%) Strand=Plus/Plus Query 110508 GGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTAT 110567 || || |||||||||||||| || | | || || || || ||||| || ||||| Sbjct 59905 GGCCAGTTGGCTTCTTGCTTCCTCATCGACATGAAAGACGACAGCATTGAGGGAATTTAC 59964 Query 110568 GATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTT 110627 ||| | || ||| ||| | || || || || |||| || || ||| | || | Sbjct 59965 GATACACTGAAAATTTGCGCTATGATCTCAAAGAATGCTGGTGGTATCGGTCTCAACTGT 60024 Query 110628 CATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTT 110687 || | ||||| | | ||| | | || || |||| || | || | || || Sbjct 60025 CACAAAATTCGTGCCACCGGATCCTACATTGCTGGCACGAACGGCACATCCAACGGCCTG 60084 Query 110688 GTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAG 110744 |||| ||| | | |||| |||| |||| || ||||| |||||||||| ||| Sbjct 60085 ATTCCCATGCTTCGTGTCTACAACAACACAGCTCGTTATGTCGATCAAGGTGGCAACAAG 60144 Query 110745 AGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTA 110804 | |||| | ||||| || |||||||| || ||||| | ||| | || ||| | Sbjct 60145 CGTCCTGGCGCTTTTGCCATTTATCTCGAGCCATGGCACGCCGATGTCATTTCTTTCATG 60204 Query 110805 GAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATG 110864 || || || || || || ||| |||||| | || || || | || | || || Sbjct 60205 GATCTACGCAAGAACCACGGAAAGGAAGAAGTTCGCGCTCGCGACCTGTTCTTCGCCCTG 60264 Query 110865 TGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGT 110924 ||||| | ||| | |||||||| ||||| || | || | | ||| | || ||||| Sbjct 60265 TGGATCCCCGATCTGTTCATGAAGCGTGTGGAACAGAACGCCGAATGGACCCTGATGTG- 60323 Query 110925 CCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTAC 110981 || || || | ||| ||||| ||||||| || || | || || || || |||||| Sbjct 60324 CCCCAACGAGTGTCCCGGTCTTGCTGATGTGTACGGTGACGAATTCGAGGAGCTTTAC 60381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186781977358947