Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1917 109 4e-19 >seq1917 Length=9250 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | |||||| |||||||| || ||||||||||| || || |||||||| || || Sbjct 8948 CCACCACGCAAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGAC 9007 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || ||||| || || || || ||||||| ||||||||| || | || Sbjct 9008 AAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGG 9067 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||| || ||| |||| ||| | ||||| |||||||| Sbjct 9068 ATTCCCTCCTTGTCTTGAATCTTGCTCTTC-ACATTGTCGATCGTGTCTGAGGATTCCAC 9126 Query 33702 GTCAACCGTGATCGTTTTACCTGT 33725 || | ||| ||||| || ||||| Sbjct 9127 TTCTAGCGTAATCGTCTTTCCTGT 9150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328695879675840