Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq721 165 8e-36
seq1032 104 2e-17
>seq721
Length=104476
Score = 165 bits (182), Expect = 8e-36
Identities = 964/1531 (63%), Gaps = 31/1531 (2%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| || || || ||||| || |||||||||| ||| | |||||| ||| | ||
Sbjct 61184 TTGACTACCTGGAATTCGCCAGCAAGCACACGTCGCGAATAGATATTGCTGGTGTACGGT 61125
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
||||| |||| || ||| | || || | |||| |||||||||||| || ||
Sbjct 61124 TCAAAGCACTCGTTGAAGCCCATGATCTGTGAAGTGGATGCGGTAGGCATAGGAGCAACG 61065
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072
| ||| || ||||||| ||| | | || || ||| ||||||| | | ||| |||||
Sbjct 61064 AGCAAAGAGTTTCGCACACCATGCTCAGCAATCTTGGCCTTCAATGAGTCCCAATCCCAA 61005
Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCC--TCGACTGGCGGGAC 147130
| || || || ||| |||||| |||||||| ||| | || | || | | |||
Sbjct 61004 AGATCTGACGGGGTAACGCCCCACATATCGTACTGAAGCTCGCCCTTTGA--GACTGGAG 60947
Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCG 147190
|| | | || ||| || || |||| ||||| || || |
Sbjct 60946 AACCTTCATAGGTCTCGTAAGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAG 60887
Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250
| ||| ||| ||||| ||| ||| || |||| || | || || ||||
Sbjct 60886 CAGCATGGTAGATGGTCTCGAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCGA 60827
Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310
| |||||||| ||| | |||||||| || | ||| | ||| | ||||| || |
Sbjct 60826 ATGGCATACGAAGAGCAAGGAAGGCATCAGCAAGACCGCTAACACCAAGACCGATGGGCC 60767
Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAATC 147369
|| |||||| ||| || ||| | | |||||||||||| || || |||
Sbjct 60766 TGTGGCGCATGTTGCTCTTCTTGGC-CTCTGGCACTGGATAGTGGTTGACCTCGATGATC 60708
Query 147370 TTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTC 147429
||||| || || || || | | | | || |||| ||| ||| | ||
Sbjct 60707 TTGTTCAGATTCTTGGTGACCACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAACTTC 60648
Query 147430 CCGTCTTCGACACGTACGCATTGGTT--CACGGCGATAGACGCCAGATTGCAGACGGCCG 147487
||| ||| | || ||| |||| || || | ||| || |||||||| |||||
Sbjct 60647 TCGTTCTCG--AGGTCGACATAGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGA 60590
Query 147488 TCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTC 147547
|| || | | |||||| | ||| || | ||||| |||| || || || ||
Sbjct 60589 CTTCATCAGGTGCAGTGTACTCGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTC 60530
Query 147548 CCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGC 147607
| | ||| | ||| ||||| || || ||| || || ||| |||| ||| | |||||||
Sbjct 60529 CGAGATTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGC 60470
Query 147608 CGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTC--CTGCGCTCGCACCCGCTG 147665
| ||||| || | ||| | || | || ||| || ||| || ||||| ||
Sbjct 60469 CAGTCTCCGTCTGGGCTTCCA-GAATGGCATA-CCAGATCTTCTGAGCACGCACAGTCTC 60412
Query 147666 CCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCA 147725
|| || || || || ||||| || ||| | | ||| || ||||| |||||
Sbjct 60411 GCGTCCCCGACCTTCTTTCTCGTAGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACAC 60352
Query 147726 ATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAAC 147785
||| ||||| |||||||||| | || |||||||| | ||| | ||| | | ||
Sbjct 60351 ATCAGCAAGACCGGGACACTCGTTGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCAC 60292
Query 147786 GCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAA-- 147843
|| ||| |||||||| || | |||||| ||| | | || ||||| || || |
Sbjct 60291 ACGCTTCATGAACAGATCGGGGATCCACAGGGCGAAGAACAGGTCGCGAGC---GCGAAC 60235
Query 147844 ----TCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTGCC 147898
|||| || | |||||| | || | | | | || || ||||||||||
Sbjct 60234 TTCTTCCTTTCCGTGGTTCTTGCGT---AGATCCATGAAAGAAAT-GACATCGGCGTGCC 60179
Query 147899 AGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGC 147955
| || || | || | ||| | || || |||| || || || || ||||||| |
Sbjct 60178 ATGGCTCGAGATAAATGGCAAAAGCGCCAGGACGCTTGTTGCCACCTTGATCGACATAAC 60119
Query 147956 GCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGG 148015
| | ||||||| | || || | |||||| ||||||| | | |||||||| |||
Sbjct 60118 GAGCTGTGTTGTTGTAGACACGAAGCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGC 60059
Query 148016 AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGT 148075
| || | | ||| ||| || | || ||| ||| | || || || || | |
Sbjct 60058 CAGCAATGTAGGATCCGGTGGCACGAATTTTGTGACAGTTGAGACCGATACCACCAGCAT 59999
Query 148076 ACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTT 148135
|||||| || ||||||| || ||| ||| || || || |||||||||| ||
Sbjct 59998 TCTTTGAGATCATAGCGCAAATTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTT 59939
Query 148136 TGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGG 148195
| | | | | | || || ||| || || || |||| || || ||| || |
Sbjct 59938 TCATGTCGATGAGGAAGCAAGAAGCCAACTGGCCGTTCGGCGTACCAGCGCTGAACAGTG 59879
Query 148196 TGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTT 148255
| || ||||| || || | || | ||| | || ||||| || ||| | |
Sbjct 59878 TTGGTGATGCGTGTGTGAAGTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCT 59819
Query 148256 CGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGG 148315
|||| ||||| |||||||| || | || || ||||||| ||||||||| |||| ||||
Sbjct 59818 CGATATCGTCTCCGTGAATTCCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTCGG 59759
Query 148316 CAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACT 148375
| || | | |||| ||| || ||| || || |||||| | |||||||| |
Sbjct 59758 CGACCTTGCCATCGATCCGGAGCAGGTATGAGCGCTCTAGCGTTTTGAAGCCAAAGTATT 59699
Query 148376 TGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
||| | |||||| ||||| | |||||
Sbjct 59698 GGTAGTTGAAATCTCTGTCGTAGACAATGGC 59668
>seq1032
Length=45607
Score = 104 bits (114), Expect = 2e-17
Identities = 245/364 (67%), Gaps = 16/364 (4%)
Strand=Plus/Minus
Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973
||||| || || |||||| |||||| | ||||||||||||||||| | ||||| |||
Sbjct 28864 ATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAAGGCATGCACACCGAC 28805
Query 46974 TTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAAA---TTAAACTCGGACACGAT 47029
|| ||||| || || || | | | |||| | || | ||| | | | |
Sbjct 28804 TTCGCGTGCCTGCTGTTCT----CTCACCTGAAGAACAAGCCCTCAAAGGCTGTCG---T 28752
Query 47030 CCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCC 47089
| |||||| | ||||| || ||||| ||||||| | || | || || ||
Sbjct 28751 ACAGAGCATCATCGTCGAGGCCGTTGCGATCGAGCAGGAGTTCCTGACAGACGCCCTCCC 28692
Query 47090 CGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGA 47149
| ||| | || ||||||||||| || |||||| | || ||||| |||||||| ||
Sbjct 28691 CTGCGCACTCCTCGGCATGAACGCTAAGCTCATGTGCCAGTACATTGAATTTGTGGCCGA 28632
Query 47150 TCGTCTGTTGGTGCAGCTCGGACAACC-GAAATATTTTAATGCTCGTAATCCGTTTGAGT 47208
|||||| | || |||||| ||||| ||| | | || || || ||||| || |
Sbjct 28631 CCGTCTGCTCCTGGCGCTCGG-CAACCAGAAGTTCTACAACGCCACCAACCCGTTCGACT 28573
Query 47209 TTATGAACAACATTTCGCTCGAGGGCAAAACCAA---TTTTTTCGAGAAACGAGTCGGAG 47265
| ||| | || || ||||| | ||||| ||||| || |||||||| || || ||||
Sbjct 28572 TCATGGAGAATATCTCGCTGGGTGGCAAGACCAACTTCTTCTTCGAGAAGCGCGTTGGAG 28513
Query 47266 AGTA 47269
| ||
Sbjct 28512 ACTA 28509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476599123863720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |