Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1917 109 6e-19
seq1019 89.7 5e-13
>seq1917
Length=9250
Score = 109 bits (120), Expect = 6e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGA 134557
|||||||| | ||| || ||| ||||| |||||||||||||| | ||| || ||
Sbjct 8960 CGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAA-AGTACGACC 9018
Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617
|| || | ||| |||||||| ||||||| ||||||||| || || || || || || ||
Sbjct 9019 ATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTT 9078
Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
|||||||| || || || ||| | ||||| || |||||||| || || |||||
Sbjct 9079 GTCTTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTAAT 9138
Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAA 134704
|| || || || | || || |||||
Sbjct 9139 CGTCTTTCCTGTGAGTGTCTTGACGAA 9165
>seq1019
Length=44428
Score = 89.7 bits (98), Expect = 5e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567
||||| || ||||| ||||| |||||||||||||| | ||| || ||| ||||||
Sbjct 44428 AGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGC 44369
Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| ||||| ||||| ||||| |||||||| || || || ||||| ||
Sbjct 44368 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTC 44322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505385594468040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |