Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq721 233 2e-56 seq1917 132 5e-26 seq1019 89.7 6e-13 >seq721 Length=104476 Score = 233 bits (258), Expect = 2e-56 Identities = 810/1241 (65%), Gaps = 37/1241 (3%) Strand=Plus/Minus Query 80539 CCCCACATGTCGTGCTGCAAGAT-GCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597 |||||||| |||| ||| ||| | ||||| || | ||||| || | | |||||||| Sbjct 60986 CCCCACATATCGTACTG-AAGCTCGCCCTTTGAGACTGGAGAACCTTCATAGGTCTCGTA 60928 Query 80598 CGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657 || || | |||||||||| ||||| || | |||| || || || || ||| ||| Sbjct 60927 AGGACCAAGCTTCTTGGCCAGATCACAAGAGGCGGTAAGAGCAGCATGGTAGATGGTCTC 60868 Query 80658 AAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717 |||| |||||| | || |||| || ||||| | || | | | Sbjct 60867 GAAGATCTGGATGTTCAGCTCACGAGCCTCGGGCGACTCGAATGGCATACGAAGAGCAAG 60808 Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777 ||| | ||||| || || ||| || | |||| || | ||||||| |||| | || Sbjct 60807 GAAGGCATCAGCAAGACCGCTAACACCAAGACCGATGGGCCTGTGGCGCATGTT-GCTCT 60749 Query 80778 -CTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 || |||||| || | ||| || ||| ||||||| |||||| || || | Sbjct 60748 TCTTGGCCTCTGGCACTGGATAGTGGTTGACCTCGATGATCTTGTTCAGATTCTTGGTGA 60689 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTG---GTTCCCCT--TC-ACAA 80890 | ||| | ||| ||||| || ||||| ||||| || | |||| | || ||| Sbjct 60688 CCACCTGAACAACCTCATGCAGCTTCTGGAAGTCAAACTTCTCGTTCTCGAGGTCGACAT 60629 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950 | | || || || || || |||||||| ||||| || || |||| | || ||| Sbjct 60628 AGGTTGGCAGAGCAAGAGATGCAAGATTGCATACGGCGACTTCATCAGGTGCAGTGTACT 60569 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 ||| ||| || |||||||| || || ||| || || || || || |||||||| || Sbjct 60568 CGATGATCTCTGTGCACAAGTTGGAGCTCTTGATCGTTCCGAGATTCTTCTGGTTGCTCT 60509 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 || |||| ||| ||||||||| ||| | || || ||||| ||| | | | Sbjct 60508 TGCGGTTGGCAGCATCCTTGTAGAGGATGAAAGGTCCGCCAGTCTCCGTCTGGGCTTCCA 60449 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | ||||| | ||| |||| | || || || ||| ||||| | | | Sbjct 60448 GAATGGCATACCAGATCTTCTGAGCACGCACAGTCTCGCGTCCCCGACCTTCTTTCTCGT 60389 Query 81131 ACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGT 81190 | | |||| || ||||| | | |||||| | |||| || | || ||||||| Sbjct 60388 AGCGAGTGTAAAGCTCCTCGAATTCGTCACCGTACACATCAGCAAGACCGGGACACTCGT 60329 Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250 | |||||||||||| ||| |||| || | || ||| ||||||||| || |||| Sbjct 60328 TGGGGCACATCAGGGTCCATTCGGCGTTCTGTTCCACACGCTTCATGAACAGATCGGGGA 60269 Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCG 81308 |||| |||||| |||||||||||| |||||| | || || | || ||||| ||| Sbjct 60268 TCCACAGGGCGAAGAACAGGTCGCG--AGCGCGAACTTCTTCCTTTCCGTGGTTCTTGCG 60211 Query 81309 CAACTCGA-GAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGC--GATCGA 81365 | || | ||||| |||| || || ||||||||||| ||||| | ||| | || Sbjct 60210 TAGATCCATGAAAGAA-ATGACATCGGCGTGCCATGGCTCGAGATAAATGGCAAAAGCGC 60152 Query 81366 C----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCA 81421 | | |||| |||||| || | ||| ||||| || || ||| | ||||| | Sbjct 60151 CAGGACGCTTG---TTGCCACCTTGATCGACATAACGAGCTGTGTTGTTGTAGACACGAA 60095 Query 81422 ACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGC 81481 ||| || || | || | || |||||||| || | || || || |||| | Sbjct 60094 GCATGGGAATCAGGCCGTTGGATGTGCCGTTCGTGCCAGCAATGTAGGATCCGGTGGCAC 60035 Query 81482 GCACCTTGCTGA---TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACC 81538 | | ||| ||| ||| |||||||| ||||| | |||||| ||| ||| || Sbjct 60034 GAATTTTG-TGACAGTTG--AGACCGATACCACCAGCATTCTTTGAGATCATAGCGCAAA 59978 Query 81539 GGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGC 81598 |||| || || ||||||||||| ||||| || | ||||||||| | | ||| || Sbjct 59977 TTTTCAGTGTATCGTAAATTCCCTCAATGCTGTCGTCTTTCATGTCGATGAGGAAGCAAG 59918 Query 81599 TTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656 | || || || | || | | || || ||||||||||||| | ||||| |||| Sbjct 59917 AAGCCAACT--GGCCGTTCGGCGTACCAGCGCTGAACAGTGTTGGTGATGCGTGTGTGAA 59860 Query 81657 ATAACGGTTTGACATCAGGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAA 81715 || || ||||| || || || || || | || | | |||||||| ||||||| Sbjct 59859 GTACTTATTCGACATGTAGTTGTATGTCTCGATGGCGGCCTCG-ATATCGTCTCCGTGAA 59801 Query 81716 TACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 | |||| ||||||||||| | ||||| ||| || ||||| Sbjct 59800 TTCCGACTGCTACACGCATGATCATGTGCTGCGGTCTCTCG 59760 >seq1917 Length=9250 Score = 132 bits (146), Expect = 5e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || || || || | || Sbjct 9165 TTCGTCAAGACACTCACAGGAAAGACGATTACGCTAGAAGTGGAATCCTCAGACACGATC 9106 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| ||||| || ||||| |||||||||||||| || || |||||||||||||| Sbjct 9105 GACAATGTGAAGAGCAAGATTCAAGACAAGGAGGGAATCCCACCGGACCAGCAGCGTCTG 9046 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| || || ||||| | || |||| |||||| | ||||||| || | || ||| Sbjct 9045 ATTTTCGCAGGCAAGCAGTTGGAAGATGGTCGTACTTTGTCAGACTACAACATTCAGAAG 8986 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 || |||||| || | || |||||| | || |||||||| Sbjct 8985 GAGAGCACTCTGCACTTGGTGTTGCGTTTGCGTGGTGGACA 8945 >seq1019 Length=44428 Score = 89.7 bits (98), Expect = 6e-13 Identities = 127/182 (70%), Gaps = 15/182 (8%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||||||||| |||| |||| || | ||| | Sbjct 44262 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGATACGATTGACAACGTCAAGTC- 44320 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||| |||||||| ||||||||||| | || ||||| || ||| Sbjct 44321 --------------GGAGGGCATTCCTCCGGACCAGCAGCGCTTGATCTTTGCCGGCAAG 44366 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | ||| || || | ||||| || | || ||||| |||||||| || Sbjct 44367 CAGCTCGAGGACGGTCGCACGCTCTCTGACTACAACATTCAGAAGGAGTCCACTCTCCAC 44426 Query 27610 CT 27611 || Sbjct 44427 CT 44428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570295949760240