Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1917 136 9e-27 >seq1917 Length=9250 Score = 136 bits (150), Expect = 9e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| |||||| ||| || || ||||| || || | | || | |||||||||| ||| Sbjct 8971 GTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATCTTCCAACTG 9030 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||||||||| || || || || ||||| || || | ||| |||||||| || ||||| Sbjct 9031 CTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAATCTT 9090 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||||| || ||||| ||||| ||| ||| || || || || ||||||||||| || Sbjct 9091 GCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGTCTTTCCTGT 9150 Query 211091 GAGAGTCTTTACAAA 211105 ||| ||||| || || Sbjct 9151 GAGTGTCTTGACGAA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159121895735855