Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1917 98.7 2e-15 >seq1917 Length=9250 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||| || || |||||||| || | ||||| | |||||||| | Sbjct 8968 CAAG-TGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATCTTCCA 9026 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || ||||| || || | ||||||||||| | |||||| ||||| ||||||| Sbjct 9027 ACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTGAA 9086 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | ||||||| || ||||| || ||||| || || | Sbjct 9087 TCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGTCTTTC 9146 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | ||||| ||||| ||||| Sbjct 9147 CTGTGAGTGTCTTGACGAA 9165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153790834192117