Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1917 120 2e-22 seq1019 82.4 5e-11 >seq1917 Length=9250 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 |||||||| ||| || ||||||||||| || |||||||| || | | || | || Sbjct 8962 CAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGACAAAGTACGACCATC 9021 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| |||||| || || || |||| ||||||||| || | || | || ||||| || Sbjct 9022 TTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTC 9081 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||||| | | || ||||| | ||||||||| || | ||||||||| Sbjct 9082 TTGAATCTTGCTCTTCACATTGTCGATCGTGTCTGAGGATTCCACTTCTAGCGTAATCGT 9141 Query 44305 CTTTCCCGTGAGGGTCTTCACGAA 44328 |||||| ||||| ||||| ||||| Sbjct 9142 CTTTCCTGTGAGTGTCTTGACGAA 9165 >seq1019 Length=44428 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||| |||||| || |||||||| || | ||| ||| |||| || ||| Sbjct 44428 AGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGC 44369 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||||| |||||||||||||| |||||||| || | ||| Sbjct 44368 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGG 44331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359981506774659