Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1917 113 4e-20
seq1019 109 5e-19
>seq1917
Length=9250
Score = 113 bits (124), Expect = 4e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || | ||| ||||||| ||||| |||||||||||||||||||| ||||| ||
Sbjct 8948 CCACCACGCAAACGCAACACCAAGTGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCTGAC 9007
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || || | || || | ||||||||| ||||| ||||| ||||| ||||||| ||
Sbjct 9008 AAAGTACGACCATCTTCCAACTGCTTGCCTGCGAAAATCAGACGCTGCTGGTCCGGTGGG 9067
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| || || |||| || | | | ||||| || |||||
Sbjct 9068 ATTCCCTCCTTGTCTTGAATCTTGCTCTTC-ACATTGTCGATCGTGTCTGAGGATTCCAC 9126
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853
|| | ||| ||||| || || || || ||||| |||||
Sbjct 9127 TTCTAGCGTAATCGTCTTTCCTGTGAGTGTCTTGACGAA 9165
>seq1019
Length=44428
Score = 109 bits (120), Expect = 5e-19
Identities = 89/108 (82%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716
|| || || ||| ||||||||||||||| ||||| ||||| ||||| |||| ||||||
Sbjct 44428 AGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCGAGC 44369
Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
||||||||||| || |||| |||||| ||||||| |||| || ||||
Sbjct 44368 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCC 44321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462292286372400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |