Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq7 123 3e-23 >seq7 Length=635569 Score = 123 bits (136), Expect = 3e-23 Identities = 337/511 (66%), Gaps = 4/511 (1%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| | ||| | |||||||| ||||| || ||||| | | || || || | Sbjct 462328 TTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTTT 462269 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||||| || || || || | || | | | ||| || |||| || || | Sbjct 462268 CCATGAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTACCCAAAGCGATGAGGA 462209 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | ||| || |||||||| || ||||| ||| | ||||||| || | |||| Sbjct 462208 GACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAAAGA- 462150 Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | || |||||||| || ||||| ||| |||||| || | || ||||| | || | Sbjct 462149 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGATGACG 462090 Query 16913 -CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || | ||| || || ||| || || || ||||| || | || |||||||| Sbjct 462089 TCTTG-AACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 462031 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 |||| || | || ||||| | | ||| |||||||| || || || | |||| ||| Sbjct 462030 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCAT 461971 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 || || ||||| | ||| || || | ||||| || || || ||||| ||||| || Sbjct 461970 GAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTC 461911 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 |||| || || |||| | |||| || | || | || || | |||||||||| Sbjct 461910 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 461851 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182 |||| ||||| || | ||| |||||| Sbjct 461850 GACAGCCCAGTCGGCCTTCTTCTTAATGCAA 461820 Score = 105 bits (116), Expect = 7e-18 Identities = 196/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| || ||| |||||||||| ||||||||||| || || Sbjct 461714 ATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGG 461655 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| || || | || |||||||| | |||||| || ||| Sbjct 461654 AAACCGTAGAAGCATCGTGCCTCTGGAATCTGAACTTCACCACTGAATCGCTCAACTAAG 461595 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| ||||| ||||| |||||||| || || | | || |||||| || Sbjct 461594 TTCTCGTTGACGATTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAAATGAAGTAA 461535 Query 17414 TTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 ||||| | || | |||||| | | ||| || |||| ||| | ||| Sbjct 461534 CGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGATAAATCAATCTCT 461475 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 || | |||||| ||| ||| ||||||| || ||||| | ||| || Sbjct 461474 TCTGCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACATCTGCCAGAT 461428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517535100293640