Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq81 300 2e-76 seq7 134 2e-26 >seq81 Length=155533 Score = 300 bits (332), Expect = 2e-76 Identities = 1317/2062 (64%), Gaps = 43/2062 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 110577 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 110636 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || | |||| || |||||||||| ||| | ||| | ||||| || Sbjct 110637 CCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 110696 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || |||||||| |||||| |||||| ||||| || || | || |||||||||| | Sbjct 110697 TGAATATTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACA 110756 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 || || ||| | ||||||||||| ||| || |||| ||| || || |||||| Sbjct 110757 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 110816 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 || | |||| ||||| ||||||||||| | || || | |||||| || | ||| | Sbjct 110817 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGATTCTTCATGTTGTCAGAC 110876 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | || | || | || || || ||||| ||||| |||||||| Sbjct 110877 CAGAGACCCATATCAACAAGGTCTTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 110936 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | | || | || | ||| ||||| || || ||||| | | | || || || Sbjct 110937 GCAAGAACACGACGGGAGTAGATATTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGCCA 110996 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | |||||| | || ||||| ||||||||||| || | | | |||| | ||| Sbjct 110997 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTTCGGATTCCG 111056 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344 | | |||| | || | || ||||||| ||| | ||| | ||| ||| Sbjct 111057 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 111116 Query 53345 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 53404 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 111117 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAGGTTTCGTATGGG 111176 Query 53405 CC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 53460 || |||||| | | || | | || | | || ||| ||| || ||||| || Sbjct 111177 CCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 111232 Query 53461 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG--A 53518 ||| || | | || || | || ||||| || ||||||||| | ||||| | Sbjct 111233 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGCCA 111291 Query 53519 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 53578 | ||| || || || | ||||| || || | | ||||||||| ||| | ||| Sbjct 111292 AGAAA-GCATCAGCAAGACCTTGGACTCCGACAGCGATAGGTCGATGACGGAAATTGCTT 111350 Query 53579 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACA 53638 || || |||| | ||||| || || ||||| ||||| || || | |||||| || Sbjct 111351 CTTCTGGCCTCTGCGACTGGATAGTAGTTGATATCGATAATCTTGTTCAAGTTTCTAACG 111410 Query 53639 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC-----TATT-AC- 53691 | |||| ||| || || | || || | |||||| | ||| || | || || Sbjct 111411 ACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGACG 111470 Query 53692 AAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 53751 ||| || | | || || || |||| ||||| || ||||||| | | | || Sbjct 111471 AAAGTTGGTAGA-GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTA 111529 Query 53752 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 53811 | | || || ||||| | ||| | || || || | || | ||| ||||| Sbjct 111530 CTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTACT 111589 Query 53812 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTC 53871 ||| ||||| || |||||||| ||||| ||||| || | || || || | || | || Sbjct 111590 CTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGCCTC 111649 Query 53872 TATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT 53929 | ||||| | ||| | ||||||| || || ||| | ||| || ||| Sbjct 111650 AAGAATCGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGCCTT 111706 Query 53930 -TCGTATAGT--GTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 53986 ||||| ||| | | | || ||||| || || |||||| |||| || ||| Sbjct 111707 CTCGTAGCCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAACCTGGA 111764 Query 53987 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 54046 ||||| | || ||||| | | ||| || || | | | || || ||||| || ||| Sbjct 111765 CATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGA 111824 Query 54047 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 54106 ||||||||||| | || || ||||| | | | | ||| || || || |||| Sbjct 111825 TCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATTC 111884 Query 54107 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATA 54166 || ||||| |||||| | | || ||| | |||||| ||||||| ||| | | | Sbjct 111885 TTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAAG 111944 Query 54167 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 54226 | ||||| || ||||| || || ||||| | ||||| || ||||| || |||||| Sbjct 111945 GCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGG 112004 Query 54227 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 54286 | ||| |||| |||||| ||||| |||||||| |||| || || ||| ||||| Sbjct 112005 AGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGCA 112064 Query 54287 CGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 54346 || || | ||| ||||| || || || || | || ||||| | || || Sbjct 112065 CGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATC 112124 Query 54347 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 54406 || || ||||| || || || || ||||| || ||| |||||| | || || || Sbjct 112125 TTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGAT 112184 Query 54407 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 54466 || | ||| | ||| ||||| || | || || ||||| || || || | Sbjct 112185 GAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGTAC 112244 Query 54467 TTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAATTCC 54525 || | || | | |||||| || |||||||| || ||||| || | ||||| || Sbjct 112245 TTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCG-TGAATACC 112303 Query 54526 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAG 54585 || || |||||||| | ||| || || || | ||| ||| |||| | | || Sbjct 112304 AACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTTGCCATCAAGACGTAG 112363 Query 54586 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 54643 | ||| ||| || | ||| ||||| ||||| || | ||| ||||| ||||| ||| Sbjct 112364 AAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAA--TCTCGGTCG 112421 Query 54644 TAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACA-TCCATGGTAATACT 54702 || | ||| | |||||||||| |||| || | | |||| ||| || | || | || Sbjct 112422 TAGACAATTGCAGAGTTGAGTTCCTCCTCATGTCTCATAAC-ACATTCGAAAGT-TTCCT 112479 Query 54703 TG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCA 54761 || ||| || ||||| | | |||||| | || || ||| | ||||||| | Sbjct 112480 TGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCGCGGA 112539 Query 54762 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGG 54821 | || | ||| |||| || |||| |||||| || || || || || || | ||| | Sbjct 112540 TAACGTGCGAGAATTGTTTCTTGGTTTGTTTGTGAAGGTTAGAGACTGCAATACGAGCAG 112599 Query 54822 CTAGAATGGCATAATCCGGATG 54843 |||||||||||||||| ||||| Sbjct 112600 CTAGAATGGCATAATCGGGATG 112621 >seq7 Length=635569 Score = 134 bits (148), Expect = 2e-26 Identities = 342/515 (66%), Gaps = 9/515 (2%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| ||||| || | |||||||| || || || || || | || || || ||| Sbjct 462329 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTT 462270 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963 |||||||| ||| |||| |||| | || || | | | | ||||| | | Sbjct 462269 TCCATGAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTACCCAAAGCGATGAGG 462210 Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023 | | ||| || ||||| || || ||| ||||| | | | ||||| || | ||| Sbjct 462209 AGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAAAGA 462150 Query 24024 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083 | ||||||||| | || | |||||||| || || ||| || || || || | Sbjct 462149 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGATGACG 462090 Query 24084 GATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 24140 |||| || | || ||| | || || | | | ||| || | | |||||| Sbjct 462089 --TCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCG 462033 Query 24141 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 24200 |||||| ||| ||||| ||||| | || | ||||||||| || |||||||||| | Sbjct 462032 AAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCC 461973 Query 24201 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 24260 || || |||||||| || ||||| || || || || || ||||| || |||||||| ||| Sbjct 461972 ATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCT 461913 Query 24261 TCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGTCATGTATCCAC 24317 || || || || || || | ||| | || || | || | | || || ||||| Sbjct 461912 TCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCAT 461853 Query 24318 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352 || |||||| ||||||||||| || | ||||| Sbjct 461852 TTGACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 461818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593709554873040