Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq7 131 2e-25 seq158 109 6e-19 seq29 100 3e-16 seq32 87.8 2e-12 >seq7 Length=635569 Score = 131 bits (144), Expect = 2e-25 Identities = 202/285 (71%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||||| || ||| | || | Sbjct 461428 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTA 461487 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAA 116751 || ||||| | | | ||||||| | | | || || ||||||| | ||||| Sbjct 461488 TCAAAGGATCTCCA-CGACTGGAACAACAGACTCAATGATGACGAGCGTTACTTCATTTC 461546 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || || || |||||||| ||||| |||||||||||||| | || ||||| Sbjct 461547 CCACGTTCTCGCATTCTTCGCCGCATCAGACGGAATCGTCAACGAGAACTTAGTTGAGCG 461606 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | || || ||| | | ||||| || ||||||||||| || || ||| || Sbjct 461607 ATTCAGTGGTGAAGTTCAGATTCCAGAGGCACGATGCTTCTACGGTTTCCAAATCATGAT 461666 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||||||| | ||||| |||| || || ||||||||||| || Sbjct 461667 GGAGAACATTCACTCCGAAACATACTCTCTTCTCATCGACACATA 461711 Score = 96.9 bits (106), Expect = 4e-15 Identities = 266/400 (67%), Gaps = 6/400 (2%) Strand=Plus/Plus Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097 || || || || ||||| ||||| || || | ||||| || || ||||| | || Sbjct 461887 CGTCTTGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCATCTATC 461946 Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCC 117157 || ||||||||||| || || |||||| |||| || || ||| |||||| ||||||||| Sbjct 461947 TTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTCTCCAACGAACTCATCTCC 462006 Query 117158 AGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGA 117217 | ||||| ||||| || ||| || || || | || ||| ||| | ||| || Sbjct 462007 CGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTCCCATCTCAAGCACCG- 462065 Query 117218 CCGAGCGCGGCGCG-CGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTT 117276 || | | || | ||| || || ||||||| || |||| |||||||| || Sbjct 462066 CCCATCCAAGCAAGCCGTTCAAGACGTCATCACCGAAGCCGTCGAAATCGAGCAAGAATT 462125 Query 117277 CCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAA 117334 | | ||||| || || || |||| ||| |||| | || | | | | ||| |||| Sbjct 462126 CTTGACCGAGGCTCTTCCTTGTGC-TCTTTTGGGCATGAACT-CTACCCTCATGAAGCAA 462183 Query 117335 TACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAAC 117394 ||||| || || || || || | || || ||| ||| || ||| ||||| Sbjct 462184 TACATTGAATTTGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAGTTTACAAA 462243 Query 117395 ACGCCCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 | ||||||| | ||||| ||| | ||||||||||| Sbjct 462244 TCTGCCAACCCATTCGACTTCATGGAAAACATCTCCTTGG 462283 >seq158 Length=74113 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||||||||||||| |||| || || | | Sbjct 63356 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 63297 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| || || | || || Sbjct 63296 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCAA 63237 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| || || || || || || | |||||||| ||| |||||| Sbjct 63236 CAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAAC 63177 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| | || || || | ||||| || Sbjct 63176 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACG 63142 >seq29 Length=315494 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 ||| |||| || || || || || || |||||||| |||| |||||| | | |||| | Sbjct 103130 ATAGTCGTTAAGACCCTTACCGGAAAGACCATCACTCTCGAAGTCGAATCTTCAGACACC 103071 Query 40756 GTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACG 40814 | | |||| | || || | ||| || || || |||||||| | || || ||||| Sbjct 103070 ATCGACAACGTTAAATCGAAGA-TTCAAGATAAGGAAGGCATCCCTCCCGATCAACAACG 103012 Query 40815 ACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 40874 | |||| ||| |||||||| || || || | |||||||| ||||||||| ||||| Sbjct 103011 TTTGATCTTCGCTGGCAAACAACTTGAAGATGGTCGCACCCTTTCCGACTACAATATCCA 102952 Query 40875 GAAGGAGGCCACGCTGCATCTAGT 40898 ||||||| | || || || |||| Sbjct 102951 GAAGGAGTCTACCCTTCACTTAGT 102928 >seq32 Length=306211 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || |||||| | | Sbjct 242208 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 242267 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || || | || || ||||| | Sbjct 242268 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 242327 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || || |||| |||| || || ||| || ||||||||||| ||| Sbjct 242328 ATCTTCGCTGGAAAGCAATTGGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 242387 Query 40879 G 40879 | Sbjct 242388 G 242388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208747490480