Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq29 122 1e-22 seq127 104 4e-17 >seq29 Length=315494 Score = 122 bits (134), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| |||| || || || || || |||| | ||| | Sbjct 102680 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA 102621 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| ||||| || || ||||| || || || || || ||||||||||| Sbjct 102620 GATACCATTGATAATGTTAAATCA-AAGATTCAGGACAAGGAGGGCATTCCACCTGATCA 102562 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||||||||| || || ||||| | |||| | ||||| || Sbjct 102561 ACAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAA 102502 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||| ||| || ||||| ||||| | ||| | || |||||| Sbjct 102501 TATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGGT 102453 >seq127 Length=103845 Score = 104 bits (114), Expect = 4e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 205566 AAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCA 205625 ||||||| |||| ||||||||||||| | |||| | | |||| | |||||| Sbjct 16200 AAATTGTGCAAACATGTGACAAGGTGGTAAAGCCATTAACTTGATATCTGCAACATTCCA 16141 Query 205626 GGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATATGTGT 205685 || | | || || | ||| || ||||| |||| ||| || ||| | | Sbjct 16140 TGCACTCAGAATAATCCTCCTATCCCATGGGTTATTCTTTAATTTCCATACAATTTCCGC 16081 Query 205686 TAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAA 205745 || |||||||| ||||| ||| |||| || || |||||| ||||| ||||| || Sbjct 16080 TAGTTGATCAACACCTTGTCCTGTGTAATCCGTCTCAGCATCAATGTATTTGGCACCGAA 16021 Query 205746 ATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787 ||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct 16020 ATGTCGCCATTGAAATCCATACACAGGACCTAAATCTCCTTC 15979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755440673686400