Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq158 132 4e-26 seq29 113 4e-20 seq32 89.7 4e-13 >seq158 Length=74113 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 118527 AACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCC 118586 ||||||||||| | |||||||| ||||| |||||||||||| | ||||| ||| Sbjct 63145 AACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCT 63204 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || || ||||| ||| |||| | ||||| |||||||| || || ||||||||||| Sbjct 63205 TCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCC 63264 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 || || || || | |||| |||||||| ||| ||||||| ||| | ||| Sbjct 63265 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 63324 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| || || || || || || ||||||||| || Sbjct 63325 TTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 63360 >seq29 Length=315494 Score = 113 bits (124), Expect = 4e-20 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587 ||||| || | || || || |||||||||||||||| | | |||| ||| ||||| Sbjct 102700 ACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAAT--CCGAAAGTGTACGTCCATCCT 102757 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | || || || ||||| |||| ||||| || |||||||| || || |||||||| ||| Sbjct 102758 CAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTT 102817 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 || ||| || || | |||| ||||||| || | || ||||| | ||| | ||| Sbjct 102818 GGATCTTTGACTTTACATTATCGATAGTGTCCGATGAT-TCAACCTCCAGGGTGATCGTC 102876 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || || || ||||||||||| Sbjct 102877 TTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || ||||| || || |||| |||||| ||| ||||| ||| Sbjct 103217 TGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCTTCGAGTTGT 103276 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 ||||| ||| | || | |||||| || || ||||| || ||||||||||| || || Sbjct 103277 TTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCTTG 103336 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | |||| |||||| | ||| ||||||| ||| | || ||||||||| Sbjct 103337 GACTTAACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTCTTGCCGGTC 103396 Query 118716 A 118716 | Sbjct 103397 A 103397 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| | || ||||| | |||||||| || || || ||||| ||| Sbjct 102908 TACCACCACGAAGTCTGAGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGG 102967 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||| || || ||||| |||||| |||| | ||| || |||||||||| Sbjct 102968 AAAGGGTGCGACCATCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAG 103027 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| ||||| ||| ||| || |||||| | |||| |||||| | |||| Sbjct 103028 GGATGCCTTCCTTATCTTGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGA 103087 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 | |||| || | || || ||||| || || || || Sbjct 103088 CTTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAAC 103124 >seq32 Length=306211 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 ||||| ||||||||||| | ||| || ||||| | || ||||||||| |||| Sbjct 242386 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGATC 242327 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | ||| || ||||||||||| || ||||||||||| || || || || | ||| Sbjct 242326 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 242267 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | |||||| | | ||||||||| | ||| | || ||||| || || || || || || Sbjct 242266 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 242208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433821818699116