Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq29 120 3e-22 seq158 111 2e-19 >seq29 Length=315494 Score = 120 bits (132), Expect = 3e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 |||||| || || | | ||| | |||||| ||||| ||||| ||||||||||||||||| Sbjct 102447 CTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTA 102506 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 ||| | || || | |||| || | |||||| || || || || | ||| || || || Sbjct 102507 ATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATC 102566 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCG 43128 | || | || |||||||||| ||| | |||| ||| | | | | || || || Sbjct 102567 AGGTGGAATGCCCTCCTTGTCC-TGAATCTTTGATTTAACATTATCAATGGTATCTGACG 102625 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || | || || || || || |||| ||||| |||||||||||||| Sbjct 102626 ATTCCACTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 >seq158 Length=74113 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| |||||||| || | || ||||||||| || |||||||| | || || || | Sbjct 63141 ACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACC 63200 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || ||||| ||||| || ||||| || | |||||| || |||| || | | |||||| Sbjct 63201 ATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTT 63260 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| || || || |||| ||||| Sbjct 63261 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 63320 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||||||| || ||||| || ||||| ||||| Sbjct 63321 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571805999250440