Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq29 86.0 4e-12 seq158 82.4 5e-11 >seq29 Length=315494 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| || || ||||| || || || ||||| || || || | | |||| Sbjct 102469 AGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCC 102528 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||||||||| ||||| ||||| | || || || || || | || ||||||||| Sbjct 102529 TCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCC 102588 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| || | || | || | ||| | |||||| || || | || || || Sbjct 102589 TGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTC 102648 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || | || || |||||||| ||||| Sbjct 102649 TTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 >seq158 Length=74113 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34180 CACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTC 34239 ||||| ||| | |||| || || || |||||||| ||||| || || | || || Sbjct 63147 CACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTC 63206 Query 34240 CAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGC 34299 | ||||| || ||||| || | ||||| || ||| || | | ||||||||| Sbjct 63207 TAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCCTG 63266 Query 34300 TATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359 ||||| ||| | || | | || | || | || || || || | ||||||||||| Sbjct 63267 GATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTT 63326 Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| ||||| || || || ||||||||||| Sbjct 63327 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323065609534880