Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq158 125 6e-24 seq29 120 2e-22 >seq158 Length=74113 Score = 125 bits (138), Expect = 6e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183 ||| |||||||| || || |||||| || |||||||| ||| || |||| | || Sbjct 63144 TAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATC 63203 Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || ||||| ||||||||||| ||||| |||||||| ||||| || | ||||||||||| Sbjct 63204 TTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTC 63263 Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 | || || ||| || | | | ||||| | ||| ||||| | ||| || || Sbjct 63264 CTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 63323 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| || ||||| || ||||| |||||| Sbjct 63324 TTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 63357 >seq29 Length=315494 Score = 120 bits (132), Expect = 2e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| ||||| ||||| ||| |||| | || || |||||| Sbjct 103217 TGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCTTCGAGTTGT 103276 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||||||||| ||||| ||||||||||| ||||| | |||||||||||| || || Sbjct 103277 TTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCTTG 103336 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | | |||| | | ||| ||||| | |||||| |||||||| ||| Sbjct 103337 GACTTAACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTCTTGCCGGTC 103396 Query 45314 A 45314 | Sbjct 103397 A 103397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395067385289083