Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq81 224 9e-54
seq7 105 6e-18
seq29 96.9 3e-15
>seq81
Length=155533
Score = 224 bits (248), Expect = 9e-54
Identities = 606/918 (66%), Gaps = 12/918 (1%)
Strand=Plus/Plus
Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124
|||||| |||||||| || || | |||| | || || |||| || | |||||
Sbjct 111527 GTACTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTT 111586
Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184
|| || ||||| | ||||||||| |||||| | || | || |||||| || |
Sbjct 111587 ACTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGC 111646
Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTT 23243
||| | |||| ||| | | ||||| | | | ||| || ||| |||| | |
Sbjct 111647 CTCAAGAATCGAGTACCAAAGCTTTTGAGCCTTGATA-GTCTTGCGACCCTTGCCTGCCT 111705
Query 23244 CCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCG 23303
|||||| | ||| | || || || || | || ||| || |||| || ||
Sbjct 111706 TCTCGTAGCCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAACCTGGAC 111765
Query 23304 ATTGCATCGGACACATGAGACTCCACATTG--AGTCATTTTCAACGCGTCTCATAAAAAG 23361
||| | || ||||||||| |||| || | || |||||||| || |||| || ||
Sbjct 111766 ATTCGTTGGGGCACATGAGAGTCCA-ATCCCCATTC-TTTTCAACACGCTTCATGAATAG 111823
Query 23362 ATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTT 23421
||| || ||||| | |||||||| || ||||| || || || || || || || ||
Sbjct 111824 ATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATT 111883
Query 23422 CTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAA 23481
||| | ||| | || || || || ||||||||||| || || |||||||| |||||
Sbjct 111884 CTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAA 111943
Query 23482 CGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCT 23541
|| || || | ||| || || || ||||| || || | ||| ||||||||| | ||||
Sbjct 111944 GGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCG 112003
Query 23542 TAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGC 23601
||||| || || | ||||||||| || || || | | ||| | ||
Sbjct 112004 GAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGC 112063
Query 23602 TCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTG 23661
|| | |||||| || || ||| || || ||| | || || ||||| || ||
Sbjct 112064 ACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAAT 112123
Query 23662 TTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGA 23721
|||| ||| ||||| || || || || |||||||| || | ||| | ||| || ||
Sbjct 112124 CTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGA 112183
Query 23722 AGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA 23781
|| | ||| |||| || ||| | || ||||| ||||| || || || || |||||
Sbjct 112184 TGAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGTA 112243
Query 23782 TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACC 23841
|| ||||| | |||||| || ||||| || || || || || ||||| |||||
Sbjct 112244 CTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCGTGAATACC 112303
Query 23842 GATGGCGACGCGCATCATCATGTATTGAGGTC--TCT-CGACCGTGACGCCGTTAATTTT 23898
| ||| || ||||| ||||| | ||| || | ||| ||||| | ||| | ||
Sbjct 112304 AACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTT---GCCATCAAGACG 112360
Query 23899 GAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958
| || ||||| || | | || ||||||||||| || | ||||| || || || ||
Sbjct 112361 TAGAAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAATCTCGGTC 112420
Query 23959 GTGCACTATGGCCGAATT 23976
|| || || || || ||
Sbjct 112421 GTAGACAATTGCAGAGTT 112438
>seq7
Length=635569
Score = 105 bits (116), Expect = 6e-18
Identities = 225/333 (68%), Gaps = 5/333 (2%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| |||||||| ||||| || ||||||| ||||| | || |
Sbjct 461428 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTA 461487
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||| ||| | | ||||| || ||| | | || |||
Sbjct 461488 TCAAAGGATCTCCACGACTGGAACAACAGACTCAATGATGACGAGCGTTACTTCATTTCC 461547
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || ||||||||||| || || || || |||||||| || || || ||
Sbjct 461548 CACGTTCTCGCATTCTTCGCCGCATCAGACGGAATCGTCAACGAGAACTTAGTTGAGCGA 461607
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| ||||| || | | ||||| ||||||| ||||| || ||| | ||
Sbjct 461608 TTCAGTGGTGAAGTTCAGATTCCAGAGGCACGATGCTTCTACGGTTTCCAAATCATGATG 461667
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAACGA 57865
|| ||| | || || |||| || || || |||||||| || || | ||||| ||| |
Sbjct 461668 GAGAACATTCACTCCGAAACATACTCTCTTCTCATCGACACATATATCAAGGAGCAAGCA 461727
Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898
| | | || || || ||||| || || || ||
Sbjct 461728 CAAAAGACATA-CCTCTTCAATGCTATTGATAC 461759
>seq29
Length=315494
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| || || || || ||||||||| | || |||||| | ||
Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | |||| | || || || ||| | || ||||| || | || ||||| ||
Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGA-TCCAAGATAAGGAGGGTATCCCACCCGATCA 102790
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|| ||||| || || ||||| || || | || || | | | || | ||||| |
Sbjct 102789 ACAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGA-TGGACGTACACTTTCGGATTACA 102731
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||| ||||||||| | ||| |||| ||| | || | || ||||
Sbjct 102730 ACATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGGTA 102680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445757356514160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |