Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq81 224 9e-54 seq7 105 6e-18 seq29 96.9 3e-15 >seq81 Length=155533 Score = 224 bits (248), Expect = 9e-54 Identities = 606/918 (66%), Gaps = 12/918 (1%) Strand=Plus/Plus Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124 |||||| |||||||| || || | |||| | || || |||| || | ||||| Sbjct 111527 GTACTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTT 111586 Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184 || || ||||| | ||||||||| |||||| | || | || |||||| || | Sbjct 111587 ACTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGC 111646 Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTT 23243 ||| | |||| ||| | | ||||| | | | ||| || ||| |||| | | Sbjct 111647 CTCAAGAATCGAGTACCAAAGCTTTTGAGCCTTGATA-GTCTTGCGACCCTTGCCTGCCT 111705 Query 23244 CCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCG 23303 |||||| | ||| | || || || || | || ||| || |||| || || Sbjct 111706 TCTCGTAGCCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAACCTGGAC 111765 Query 23304 ATTGCATCGGACACATGAGACTCCACATTG--AGTCATTTTCAACGCGTCTCATAAAAAG 23361 ||| | || ||||||||| |||| || | || |||||||| || |||| || || Sbjct 111766 ATTCGTTGGGGCACATGAGAGTCCA-ATCCCCATTC-TTTTCAACACGCTTCATGAATAG 111823 Query 23362 ATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTT 23421 ||| || ||||| | |||||||| || ||||| || || || || || || || || Sbjct 111824 ATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATT 111883 Query 23422 CTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAA 23481 ||| | ||| | || || || || ||||||||||| || || |||||||| ||||| Sbjct 111884 CTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAA 111943 Query 23482 CGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCT 23541 || || || | ||| || || || ||||| || || | ||| ||||||||| | |||| Sbjct 111944 GGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCG 112003 Query 23542 TAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGC 23601 ||||| || || | ||||||||| || || || | | ||| | || Sbjct 112004 GAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGC 112063 Query 23602 TCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTG 23661 || | |||||| || || ||| || || ||| | || || ||||| || || Sbjct 112064 ACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAAT 112123 Query 23662 TTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGA 23721 |||| ||| ||||| || || || || |||||||| || | ||| | ||| || || Sbjct 112124 CTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGA 112183 Query 23722 AGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA 23781 || | ||| |||| || ||| | || ||||| ||||| || || || || ||||| Sbjct 112184 TGAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGTA 112243 Query 23782 TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACC 23841 || ||||| | |||||| || ||||| || || || || || ||||| ||||| Sbjct 112244 CTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCGTGAATACC 112303 Query 23842 GATGGCGACGCGCATCATCATGTATTGAGGTC--TCT-CGACCGTGACGCCGTTAATTTT 23898 | ||| || ||||| ||||| | ||| || | ||| ||||| | ||| | || Sbjct 112304 AACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTT---GCCATCAAGACG 112360 Query 23899 GAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958 | || ||||| || | | || ||||||||||| || | ||||| || || || || Sbjct 112361 TAGAAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAATCTCGGTC 112420 Query 23959 GTGCACTATGGCCGAATT 23976 || || || || || || Sbjct 112421 GTAGACAATTGCAGAGTT 112438 >seq7 Length=635569 Score = 105 bits (116), Expect = 6e-18 Identities = 225/333 (68%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| |||||||| ||||| || ||||||| ||||| | || | Sbjct 461428 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTA 461487 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | ||||| || ||| | | || ||| Sbjct 461488 TCAAAGGATCTCCACGACTGGAACAACAGACTCAATGATGACGAGCGTTACTTCATTTCC 461547 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||||||||| || || || || |||||||| || || || || Sbjct 461548 CACGTTCTCGCATTCTTCGCCGCATCAGACGGAATCGTCAACGAGAACTTAGTTGAGCGA 461607 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||||| || | | ||||| ||||||| ||||| || ||| | || Sbjct 461608 TTCAGTGGTGAAGTTCAGATTCCAGAGGCACGATGCTTCTACGGTTTCCAAATCATGATG 461667 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAACGA 57865 || ||| | || || |||| || || || |||||||| || || | ||||| ||| | Sbjct 461668 GAGAACATTCACTCCGAAACATACTCTCTTCTCATCGACACATATATCAAGGAGCAAGCA 461727 Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898 | | | || || || ||||| || || || || Sbjct 461728 CAAAAGACATA-CCTCTTCAATGCTATTGATAC 461759 >seq29 Length=315494 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || ||||||||| | || |||||| | || Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || || || ||| | || ||||| || | || ||||| || Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGA-TCCAAGATAAGGAGGGTATCCCACCCGATCA 102790 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 || ||||| || || ||||| || || | || || | | | || | ||||| | Sbjct 102789 ACAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGA-TGGACGTACACTTTCGGATTACA 102731 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||| ||||||||| | ||| |||| ||| | || | || |||| Sbjct 102730 ACATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGGTA 102680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445757356514160