Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq81 273 3e-68 seq7 141 1e-28 >seq81 Length=155533 Score = 273 bits (302), Expect = 3e-68 Identities = 1311/2063 (64%), Gaps = 45/2063 (2%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 110577 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 110636 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| || |||||||||| || | ||| | ||||| || Sbjct 110637 CCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 110696 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || |||||||| |||||| |||||| ||||| || || | || |||||||||| | Sbjct 110697 TGAATATTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACA 110756 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || || ||| | ||||||||||| ||| || |||| ||| || || |||||| Sbjct 110757 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 110816 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 || | |||| ||||||||||||||||| | || || | |||||| || | ||| | Sbjct 110817 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGATTCTTCATGTTGTCAGAC 110876 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | || | || | || || |||||||| |||||||||||||| Sbjct 110877 CAGAGACCCATATCAACAAGGTCTTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 110936 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | | || | || | ||| ||||| || || ||||| | | || || || Sbjct 110937 GCAAGAACACGACGGGAGTAGATATTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGCCA 110996 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 | |||||| | || ||||| ||||||||||| || | | | |||| | ||| Sbjct 110997 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTTCGGATTCCG 111056 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNN 62582 | | |||| | || | | ||||||| ||| | ||| | ||| ||| Sbjct 111057 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 111116 Query 62583 NNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGT 62642 ||||| || ||| ||| | | || ||| ||| || || ||||| Sbjct 111117 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAGGTTTCGTATGGG 111176 Query 62643 CC---TTCCTTCTC-AGCTAGTTTAC--AACTCGCCTCTAATGCACCGTAATAAATGGTT 62696 || |||||| | | || | || || | | || ||| ||| || ||||| Sbjct 111177 CCAAGTTCCTTTGCGATCTCG---ACGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTC 111230 Query 62697 TCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG- 62755 || || || | | || || | || ||||| ||| ||||||||| | ||||| Sbjct 111231 TCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGC 111289 Query 62756 -AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62814 || ||| || || || | ||||| || || | | ||||||||| ||| | ||| Sbjct 111290 CAAGAAA-GCATCAGCAAGACCTTGGACTCCGACAGCGATAGGTCGATGACGGAAATTGC 111348 Query 62815 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62874 || || |||| | ||||| || || ||||| ||||| || || | ||||| | Sbjct 111349 TTCTTCTGGCCTCTGCGACTGGATAGTAGTTGATATCGATAATCTTGTTCAAGTTTCTAA 111408 Query 62875 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT---A 62928 | | |||| ||| || || | || || | |||||| | || | ||| || | Sbjct 111409 CGACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGA 111468 Query 62929 C-AAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA 62987 | ||| || | | || | || |||| ||||| || ||||||| | | | Sbjct 111469 CGAAAGTTGGTAGA-GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAG 111527 Query 62988 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 63047 || | | || || ||||| | ||| | ||||| || | || | ||| ||| Sbjct 111528 TACTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTA 111587 Query 63048 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63107 ||||| ||||| || |||||||| ||||| ||||| ||| | || || || | || | Sbjct 111588 CTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGCC 111647 Query 63108 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT--C 63165 || | ||||| | ||| | | ||||||| || || ||| | | | || | Sbjct 111648 TCAAGAATCGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGCC 111704 Query 63166 TT-TCGTATAGA--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAG 63222 || ||||| ||| | | | |||||||| || || |||||| |||| | | Sbjct 111705 TTCTCGTAGCCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAACCTG 111762 Query 63223 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63282 ||||||| | || ||||| | | ||| || || | | | || || ||||| || | Sbjct 111763 GACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATA 111822 Query 63283 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTAT 63342 ||||||||||||| | || || ||||| | || | | ||| || || || || Sbjct 111823 GATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGAT 111882 Query 63343 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63402 |||| ||||| |||||| | | || ||| | |||||| ||||||| ||| | || | Sbjct 111883 TCTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAA 111942 Query 63403 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63462 | ||||| || ||||| || || ||||| | ||||| || ||||| || |||||| Sbjct 111943 AGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTC 112002 Query 63463 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGG 63522 | ||| |||| ||||||||| || | ||||||||||||| || || | ||| ||| Sbjct 112003 GGAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGG 112062 Query 63523 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63582 |||| || | ||| ||||| || || || || | || ||||| | || || Sbjct 112063 CACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAA 112122 Query 63583 GTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGC 63642 || || || || || || || || || || || || |||||| | || || || Sbjct 112123 TCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATG 112182 Query 63643 TAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63702 || | ||| | | ||| ||||| || | || || ||||| || || || Sbjct 112183 ATGAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGT 112242 Query 63703 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATT 63761 | || | || | | |||||| || || ||||| || ||||| || | ||||| Sbjct 112243 ACTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCG-TGAATA 112301 Query 63762 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTC 63821 || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 112302 CCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTTGCCATCAAGACGT 112361 Query 63822 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63879 | | ||| ||| || | ||| ||||| ||||| || | ||| ||||| ||||| | Sbjct 112362 AGAAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAA--TCTCGGT 112419 Query 63880 CGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATAC 63939 |||| | ||| | || ||||| | |||| || | | |||| || | || | | Sbjct 112420 CGTAGACAATTGCAGAGTTGAGTTCCTCCTCATGTCTCATAACACATTCGAAAGT-TTCC 112478 Query 63940 TTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 63998 ||| ||| || ||||| | | |||||| | || || ||| | | ||||||| Sbjct 112479 TTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCGCGG 112538 Query 63999 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCG 64058 || || | ||| |||| || |||| ||||| || || || | || || | || Sbjct 112539 ATAACGTGCGAGAATTGTTTCTTGGTTTGTTTGTGAAGGTTAGAGACTGCAATACGAGCA 112598 Query 64059 GCTAGAATGGCATAATCCGGATG 64081 ||||||||||||||||| ||||| Sbjct 112599 GCTAGAATGGCATAATCGGGATG 112621 >seq7 Length=635569 Score = 141 bits (156), Expect = 1e-28 Identities = 341/513 (66%), Gaps = 5/513 (1%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||||| || | |||||||| || || || || || |||| || || ||| Sbjct 462329 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTT 462270 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||| || || || |||| | ||||||| ||| | ||||| | | Sbjct 462269 TCCATGAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTACCCAAAGCGATGAGG 462210 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | | ||| || || ||||| || ||| ||||| | | | ||||| || | || Sbjct 462209 AGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAAAGA 462150 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 | ||||||||| | || | |||||||| || || || || | || || | Sbjct 462149 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGATGACG 462090 Query 33531 AATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 | ||||| || ||| | || || || | ||| || | | |||||||| Sbjct 462089 TCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 462031 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 |||| ||| ||||| ||||| | || | |||||| || || |||||||||| ||| Sbjct 462030 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCAT 461971 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 || |||||||| || ||||| || || || ||||| |||||||| ||||| || ||||| Sbjct 461970 GAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTC 461911 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTT 33766 || ||||| || || | ||| | | || | || | | || || ||||| || Sbjct 461910 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 461851 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 |||||| ||||||||||| || | ||||| Sbjct 461850 GACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 461818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629804822575440