Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq81 154 1e-32 seq7 82.4 7e-11 >seq81 Length=155533 Score = 154 bits (170), Expect = 1e-32 Identities = 391/589 (66%), Gaps = 8/589 (1%) Strand=Plus/Plus Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 || |||||||||||| || ||||| |||| ||| || ||| ||||| || || | | Sbjct 111756 AAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTC 111815 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084 || |||| |||||| | ||| || || ||| || | ||| | | | |||||| || Sbjct 111816 ATGAATAGATCAGGAATCCACAAGGC-GTAGAAGAGATCGCGTGCACGAACTTCTTCCTT 111874 Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || |||||| | || || || ||||| | ||| || ||||||||||| | || Sbjct 111875 ACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTA 111934 Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204 || | | || || || | || | ||| || |||| || |||||| | ||||| || Sbjct 111935 AACAGCAAAGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTT 111994 Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264 | | || | |||||| || ||||| || || || || || |||||| || || | Sbjct 111995 GAAAACTCGGAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGC 112054 Query 38265 ACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAA 38324 ||| | || || || | || | || || ||||| |||| ||||| || | Sbjct 112055 ACCAGTGGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCAT 112114 Query 38325 AGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTAT 38384 ||| || || || ||||| | ||||| || |||||||| ||||| || || | || Sbjct 112115 AGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCAT--GTCG-AT 112171 Query 38385 AA---AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGC 38441 || | || || | ||| | |||||| || ||| || | ||| || || || Sbjct 112172 AAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGC 112231 Query 38442 ATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACC 38501 |||| |||| | || | |||| |||| |||||||| || || || |||||| | Sbjct 112232 ATGTGTGAAGTACTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATC 112291 Query 38502 GCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550 ||||||||||| | | || | ||| | ||| |||||||| | |||| Sbjct 112292 ACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCT 112340 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||||| ||||| ||| || | | || | | ||| |||||||| || Sbjct 110571 TCGACGGTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTC 110630 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTAT-GTAGGATT 36908 || | |||||| |||| || |||||||||| || | | |||| || ||||||| Sbjct 110631 TTCAAACCCAATTTCCAACCAGCAAAATGCATAGATGTGA-TCTTGCCCATTGTAGGATC 110689 Query 36909 ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCAT 36968 | || | || ||||||||||| |||||| || || ||||| | || || ||||| Sbjct 110690 CTTCATGTGAATATTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCAT 110749 Query 36969 TTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATA 37010 || | ||| | |||||| || |||||||| || || || Sbjct 110750 TTGAACAATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTA 110791 >seq7 Length=635569 Score = 82.4 bits (90), Expect = 7e-11 Identities = 174/259 (67%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 11925 TTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAAC 11984 |||| || ||||| || ||||| ||||| || || ||||| ||||||||||||| | Sbjct 461686 TTTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGAA 461627 Query 11985 ACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATG 12044 ||| || || || |||| || |||| ||||| || || || || || | | Sbjct 461626 TCTGAACTTCACCACTGAATCGCTCAACTAAGTTCTCGTTGACGATTCCGTCTGATGCGG 461567 Query 12045 CAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TTATCCC 12101 | || ||||| || | || || ||||| ||||| | | | | | || | || Sbjct 461566 CGAAGAATGCGAGAACGTGGGAAATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCC 461507 Query 12102 AATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATT 12161 | || | | ||| ||||||||||| | ||||| ||||||| ||| |||| ||| | Sbjct 461506 AGTCGTGGAGATCCTTTGATAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCT 461447 Query 12162 GTTTATACATTTTCCAGAT 12180 || ||||| | |||||| Sbjct 461446 TCTTGTACATCTGCCAGAT 461428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468515294803120