Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq81 300 2e-76 seq7 136 5e-27 >seq81 Length=155533 Score = 300 bits (332), Expect = 2e-76 Identities = 1317/2062 (64%), Gaps = 43/2062 (2%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 110577 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 110636 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| || |||||||||| || | ||| | ||||| || Sbjct 110637 CCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 110696 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || |||||||| |||||| |||||| ||||| || || | || |||||||||| | Sbjct 110697 TGAATATTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACA 110756 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || || ||| | ||||||||||| ||| || |||| ||| || || |||||| Sbjct 110757 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 110816 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 || | |||| ||||||||||||||||| || || || | |||||| || | ||| | Sbjct 110817 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGATTCTTCATGTTGTCAGAC 110876 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | || | || | || || || ||||| ||||| |||||||| Sbjct 110877 CAGAGACCCATATCAACAAGGTCTTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 110936 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | | || | || | ||| ||||| || || ||||| | | | || || || Sbjct 110937 GCAAGAACACGACGGGAGTAGATATTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGCCA 110996 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 | |||||| | || ||||| ||||||||||| || | | | |||| | ||| Sbjct 110997 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTTCGGATTCCG 111056 Query 65316 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 65375 | | |||| | || | || ||||||| ||| | ||| | ||| ||| Sbjct 111057 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 111116 Query 65376 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 65435 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 111117 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAGGTTTCGTATGGG 111176 Query 65436 CC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 65491 || |||||| | | || | | || | | || ||| ||| || ||||| || Sbjct 111177 CCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 111232 Query 65492 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG--A 65549 ||| || | | || || | || ||||| || ||||||||| | ||||| | Sbjct 111233 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGCCA 111291 Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609 | ||| || || || | ||||| || || | | ||||||||| ||| | ||| Sbjct 111292 AGAAA-GCATCAGCAAGACCTTGGACTCCGACAGCGATAGGTCGATGACGGAAATTGCTT 111350 Query 65610 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 65669 || || |||| | ||||| || || ||||| ||||| || || | ||||| || Sbjct 111351 CTTCTGGCCTCTGCGACTGGATAGTAGTTGATATCGATAATCTTGTTCAAGTTTCTAACG 111410 Query 65670 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATT---AC- 65722 | |||| ||| || || | || || | |||||| | || ||||| || || Sbjct 111411 ACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGACG 111470 Query 65723 AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 65782 ||| || | | || | || |||| ||||| || ||||||| | | | || Sbjct 111471 AAAGTTGGTAGA-GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTA 111529 Query 65783 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 65842 | | || || ||||| | ||| | || || || | || | ||| ||||| Sbjct 111530 CTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTACT 111589 Query 65843 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 65902 ||| ||||| || |||||||| ||||| ||||| ||| | || || || | || | || Sbjct 111590 CTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGCCTC 111649 Query 65903 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CTT 65960 | ||||| | ||| | | ||||||| || || ||| | ||| || ||| Sbjct 111650 AAGAATCGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGCCTT 111706 Query 65961 -TCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 66017 ||||| ||| | | | |||||||| || || |||||| |||| || ||| Sbjct 111707 CTCGTAGCCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAACCTGGA 111764 Query 66018 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 66077 ||||| | || ||||| | | ||| || || | | | || || ||||| || ||| Sbjct 111765 CATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGA 111824 Query 66078 TCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 66137 ||||||||||| | || || | ||| | | | | ||| || || || |||| Sbjct 111825 TCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATTC 111884 Query 66138 TTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATA 66197 || ||||| |||||| | | || ||| |||||| ||||||| ||| | || | Sbjct 111885 TTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAAG 111944 Query 66198 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 66257 | ||||| || ||||| || || ||||| | ||||| || ||||| || |||||| Sbjct 111945 GCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGG 112004 Query 66258 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCA 66317 | ||| |||| |||||| ||||| | |||||||| |||| || || ||| | ||| Sbjct 112005 AGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGCA 112064 Query 66318 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 66377 || || | ||| ||||| || || || || | || ||||| | || || Sbjct 112065 CGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATC 112124 Query 66378 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 66437 || || ||||| || || || || ||||| || ||| |||||| | || || || Sbjct 112125 TTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGAT 112184 Query 66438 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 66497 || | ||| | ||| ||||| || | || || ||||| || || || | Sbjct 112185 GAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGTAC 112244 Query 66498 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCC 66556 || | || | | |||||| || || ||||| || ||||| || | ||||| || Sbjct 112245 TTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCG-TGAATACC 112303 Query 66557 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 66616 || || |||||||| | ||| || || || | ||| ||| |||| | | | Sbjct 112304 AACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTTGCCATCAAGACGTAG 112363 Query 66617 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 66674 | ||| ||| || | ||| ||||| ||||| || | ||| ||||| ||||| ||| Sbjct 112364 AAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAA--TCTCGGTCG 112421 Query 66675 TAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA-TCCATGGTAATACT 66733 || | ||| | |||||||||| |||| || | | |||| ||| || | || | || Sbjct 112422 TAGACAATTGCAGAGTTGAGTTCCTCCTCATGTCTCATAAC-ACATTCGAAAGT-TTCCT 112479 Query 66734 TG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCA 66792 || ||| || ||||| | | |||||| | || || ||| | | ||||||| | Sbjct 112480 TGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCGCGGA 112539 Query 66793 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGG 66852 | || | ||| |||| || |||| |||||| || || || || || || | ||| | Sbjct 112540 TAACGTGCGAGAATTGTTTCTTGGTTTGTTTGTGAAGGTTAGAGACTGCAATACGAGCAG 112599 Query 66853 CTATAATGGCATAATCCGGATG 66874 ||| |||||||||||| ||||| Sbjct 112600 CTAGAATGGCATAATCGGGATG 112621 >seq7 Length=635569 Score = 136 bits (150), Expect = 5e-27 Identities = 340/513 (66%), Gaps = 5/513 (1%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| ||||| || | |||||||| || || || || || | || || || ||| Sbjct 462329 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTT 462270 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 |||||||| |||||||| ||| | || |||| ||| | ||||| | | Sbjct 462269 TCCATGAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTACCCAAAGCGATGAGG 462210 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 | | ||| || |||||||| || ||| ||||| | | | ||||| || | ||| Sbjct 462209 AGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAAAGA 462150 Query 36047 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106 | ||||||||| | || | |||||||| || || ||| || || || || | Sbjct 462149 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGATGACG 462090 Query 36107 GATATTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 36165 | || | || ||| | || || | | | ||| || | | |||||||| Sbjct 462089 TCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 462031 Query 36166 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 36225 |||| ||| ||||| ||||| | || | ||||||||| || |||||||||| ||| Sbjct 462030 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCAT 461971 Query 36226 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 36285 || |||||||| || ||||| || || || || || ||||| || |||||||| ||||| Sbjct 461970 GAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTC 461911 Query 36286 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCACTT 36342 || || || || || | ||| | | || | || | || || ||||| || Sbjct 461910 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 461851 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375 |||||| ||||||||||| || | ||||| Sbjct 461850 GACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 461818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658159447319320