Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq29 91.5 1e-13 >seq29 Length=315494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 || || || ||||||||||| ||||| | ||| | || | || || || || ||||| Sbjct 102712 GTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGTCCA-TCCTCAAGTTGCTTACC 102770 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 |||| |||| |||||||| |||||||| || || || || || || ||| ||| || Sbjct 102771 AGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTT 102830 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 || | || | ||||| | | || ||||| | ||| | |||||| ||||| | || Sbjct 102831 TACATTATCGATAGTGTCCGATGATTCAACCTCCAGGGTGATCGTCTTTCCGGTAAGTGT 102890 Query 139747 TTTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 102891 CTTGACGAAAATCTGCATA 102909 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 |||||||||| |||||||| || || || || || ||| | |||| ||||| Sbjct 102928 ACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCATCTTCA 102987 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 || ||||| ||||| |||||| |||||| ||||||||||| |||||||| || || || Sbjct 102988 AGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTATC-TTG 103046 Query 139676 ATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 | | || | |||| | | || | ||||| | | || || || | || | ||||| Sbjct 103047 AATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATGGTCTT 103106 Query 139735 GCCGGTCAACGTTTTTACGAATAT 139758 ||||| | || || |||| ||| Sbjct 103107 TCCGGTAAGGGTCTTAACGACTAT 103130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496053936101600