Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq29 91.5 1e-13
>seq29
Length=315494
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| || || ||||||||||| ||||| | ||| | || | || || || || |||||
Sbjct 102712 GTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGTCCA-TCCTCAAGTTGCTTACC 102770
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|||| |||| |||||||| |||||||| || || || || || || ||| ||| ||
Sbjct 102771 AGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTT 102830
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
|| | || | ||||| | | || ||||| | ||| | |||||| ||||| | ||
Sbjct 102831 TACATTATCGATAGTGTCCGATGATTCAACCTCCAGGGTGATCGTCTTTCCGGTAAGTGT 102890
Query 139747 TTTTACGAATATTTGCATA 139765
|| ||||| || ||||||
Sbjct 102891 CTTGACGAAAATCTGCATA 102909
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|||||||||| |||||||| || || || || || ||| | |||| |||||
Sbjct 102928 ACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCATCTTCA 102987
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
|| ||||| ||||| |||||| |||||| ||||||||||| |||||||| || || ||
Sbjct 102988 AGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTATC-TTG 103046
Query 139676 ATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
| | || | |||| | | || | ||||| | | || || || | || | |||||
Sbjct 103047 AATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATGGTCTT 103106
Query 139735 GCCGGTCAACGTTTTTACGAATAT 139758
||||| | || || |||| |||
Sbjct 103107 TCCGGTAAGGGTCTTAACGACTAT 103130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496053936101600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |