Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq81 279 7e-70 seq7 131 2e-25 >seq81 Length=155533 Score = 279 bits (308), Expect = 7e-70 Identities = 1313/2063 (64%), Gaps = 45/2063 (2%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || ||||| || | || || || | ||||||| ||||||||| || || || | | Sbjct 110577 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 110636 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || | |||| || |||||||||| || | ||| || | ||||||| || Sbjct 110637 CCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTTGCCCATTG-TAGGATCCTTCAT 110695 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||||||||| || ||| |||||| ||||| || || | || |||||||||| | Sbjct 110696 GTGAATATTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAAC 110755 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 || || ||| | ||||||||||| ||| || |||| ||| || || |||||| Sbjct 110756 AATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAAT 110815 Query 71040 GTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 || | |||| ||||||||||||||||| ||||| || | ||| || || | ||| Sbjct 110816 ATTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGATTCTTCATGTTGTCAGA 110875 Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 ||| | | || | || | || || || ||||| ||||| |||||||| Sbjct 110876 CCAGAGACCCATATCAACAAGGTCTTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCC 110935 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 | | || | ||| | ||| ||||| || || ||||| | | || || || Sbjct 110936 GGCAAGAACACGACGGGAGTAGATATTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGCC 110995 Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276 | |||||| | || ||||| ||||||||||| || | ||| |||| | || Sbjct 110996 AAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTTCGGATTCC 111055 Query 71277 ATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNN 71336 ||| ||| | || | ||| ||||||| ||| | ||| | ||| ||| Sbjct 111056 GTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCC 111115 Query 71337 NNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATGG 71396 || ||| | || ||| ||| || |||||||| Sbjct 111116 CCACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAGGTTTCGTATGG 111175 Query 71397 TCC---TTCTTTTTCGG-CTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTT 71452 || ||| ||| || || | | || | | || || | | || ||||| | Sbjct 111176 GCCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCT 111231 Query 71453 CGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG-- 71510 ||||||| | | ||||| | || ||||| ||| ||||||||| | ||||| Sbjct 111232 CGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGCC 111290 Query 71511 AATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGA 71570 || ||| || || || | ||||| || || | | ||||||||| || | ||| Sbjct 111291 AAGAAA-GCATCAGCAAGACCTTGGACTCCGACAGCGATAGGTCGATGACGGAAATTGCT 111349 Query 71571 AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 71630 || || |||| | ||||| || || ||||| ||||| || || | ||||| || Sbjct 111350 TCTTCTGGCCTCTGCGACTGGATAGTAGTTGATATCGATAATCTTGTTCAAGTTTCTAAC 111409 Query 71631 TATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---TCTCCCATCTAT-TACAA 71686 | |||| ||| || || | || || | |||||| | || | ||| || | | Sbjct 111410 GACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGAC 111469 Query 71687 ACACGTTCA-AG-GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATA 71744 | ||| || || | || |||| ||||| || ||||||| | | | || Sbjct 111470 GAAAGTTGGTAGAGCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTA 111529 Query 71745 TTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 71804 | | |||||| ||||| | ||| | || || || | || | ||| ||||| Sbjct 111530 CTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTACT 111589 Query 71805 CTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTC 71864 ||| ||||| || |||||||| ||||| || || ||| | || || || | || | || Sbjct 111590 CTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGCCTC 111649 Query 71865 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCT--CTT 71922 | ||||| | ||| | | ||||||| || | ||||| | ||| || ||| Sbjct 111650 AAGAATCGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGCCTT 111706 Query 71923 -TCGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGA 71979 ||||| ||| | | | |||||||| || || || ||| | || || ||| Sbjct 111707 CTCGTAGCCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAACCTGGA 111764 Query 71980 CATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGA 72037 ||||| || || ||||| | | ||| || |||| || ||| || || ||||| || | Sbjct 111765 CATTCGTTGGGGCACATGAGAGTCCAATCCCCAT--TCTTTTCAACACGCTTCATGAATA 111822 Query 72038 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097 ||||||||||||| | || || ||||| | | | | || || || || || Sbjct 111823 GATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGAT 111882 Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157 |||| ||||| |||||| | | || ||| | |||||| ||||||| ||| | || | Sbjct 111883 TCTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAA 111942 Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217 | || || || ||||| || || ||||| | ||||| || ||||| || |||||| Sbjct 111943 AGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTC 112002 Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277 | ||| |||| |||||| ||||| |||||||| |||| || || ||| ||| Sbjct 112003 GGAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGG 112062 Query 72278 CACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337 |||| || || ||| ||||| || || || || | || ||||| | || || Sbjct 112063 CACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAA 112122 Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 72397 || || ||||| || || || || ||||| || ||| |||||| | || || || Sbjct 112123 TCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATG 112182 Query 72398 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 72457 || | ||| | ||| ||||| || | || || ||||| || || || Sbjct 112183 ATGAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGT 112242 Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATT 72516 | || | |||| | |||||| || || ||||| || ||||| || | || || Sbjct 112243 ACTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCG-TGAATA 112301 Query 72517 CCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTC 72576 || || || |||||||| | ||| || || || | ||| ||| |||| || | Sbjct 112302 CCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTTGCCATCAAGACGT 112361 Query 72577 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 72634 | | ||| ||| || | ||| ||||| ||||| || | ||| ||||| ||||| | Sbjct 112362 AGAAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAA--TCTCGGT 112419 Query 72635 CGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC 72694 |||| | ||| | || ||||||| |||| || | | |||| || | || | | Sbjct 112420 CGTAGACAATTGCAGAGTTGAGTTCCTCCTCATGTCTCATAACACATTCGAAAGT-TTCC 112478 Query 72695 TTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCC 72753 ||| ||| || ||||| | | |||||| | || || ||| | | ||||||| Sbjct 112479 TTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCGCGG 112538 Query 72754 ATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCG 72813 || || | ||| |||| || |||| ||||| || || || || || || | || Sbjct 112539 ATAACGTGCGAGAATTGTTTCTTGGTTTGTTTGTGAAGGTTAGAGACTGCAATACGAGCA 112598 Query 72814 GCTAGAATGGCATAATCTGGATG 72836 ||||||||||||||||| ||||| Sbjct 112599 GCTAGAATGGCATAATCGGGATG 112621 >seq7 Length=635569 Score = 131 bits (144), Expect = 2e-25 Identities = 341/515 (66%), Gaps = 9/515 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| ||||| || | |||||||| || || ||||| || |||| || || ||| Sbjct 462329 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTT 462270 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| || || || |||| | || |||| ||| | ||||| | | Sbjct 462269 TCCATGAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTACCCAAAGCGATGAGG 462210 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | | ||| || | ||||| || ||| ||||| | | | ||||| || | ||| Sbjct 462209 AGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAAAGA 462150 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 | ||||||||| | || | |||||||| || || ||| || || || || | Sbjct 462149 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGATGACG 462090 Query 42014 GATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 42070 |||| || | || ||| | || || | | | ||| || | | |||||| Sbjct 462089 --TCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCG 462033 Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130 |||||| ||| ||||| || || | || | ||||||||| || |||||||||| | Sbjct 462032 AAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCC 461973 Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCT 42190 || || |||||||| || ||||| || ||||| || || ||||| || ||||| || ||| Sbjct 461972 ATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCT 461913 Query 42191 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCAC 42247 || || || || || || | ||| | | || | || | || || ||||| Sbjct 461912 TCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCAT 461853 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282 || |||||| ||||||||||| || | ||||| Sbjct 461852 TTGACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 461818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671125584263480