Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq29 111 1e-19 >seq29 Length=315494 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCT--CATCG 43969 |||||| || | ||||| || ||||||||||| ||||| || | || | || Sbjct 102471 CACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCG--AAAGGGTTCTGCCGTCC 102528 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 ||||| || ||||||||||| ||||| ||||| || || | || | || || || || Sbjct 102529 TCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCC 102588 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||| ||| ||| || || ||| ||||||| || ||||| || | |||||||| Sbjct 102589 TGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTC 102648 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| ||||| ||||| ||||| |||||||| Sbjct 102649 TTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354770582388204