Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq29 140 7e-28
seq158 107 4e-18
>seq29
Length=315494
Score = 140 bits (154), Expect = 7e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427
||| || |||||||| || || || || ||||| ||||| || | || ||||| |||||
Sbjct 102489 TTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAA 102548
Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487
||| | | ||||||||||| || || || || || ||||||||||||| ||| |||||
Sbjct 102549 AATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATT 102608
Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | |||||| | ||| || |||| |||||| ||||||||||| | || || ||
Sbjct 102609 ATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGAC 102668
Query 104548 AAATATCTGCAT 104559
||| || |||||
Sbjct 102669 AAAGATTTGCAT 102680
Score = 136 bits (150), Expect = 9e-27
Identities = 143/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || ||||| || ||||||||| | ||| | ||| |||
Sbjct 103208 AGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCT 103267
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||||||||| || ||||| | | |||||| |||||||| ||||| || || |||
Sbjct 103268 TCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCC 103327
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| ||||| | || ||||| || | ||| ||||||| || ||||| || |||||||||
Sbjct 103328 TGGATCTTGGACTTAACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTC 103387
Query 104528 TTACCAGT 104535
|| || ||
Sbjct 103388 TTGCCGGT 103395
>seq158
Length=74113
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || || || || || || || || || || | ||| ||||||||||| |||||
Sbjct 63160 GTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCTAGTTGCTTTCCG 63219
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||||||||| || || ||||| || || ||||| ||||| | ||
Sbjct 63220 GCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTG 63279
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || || ||||| || || || || || || || || ||
Sbjct 63280 ACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTC 63339
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 63340 TTGACGAAGATCTGCAT 63356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151374457030084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |