Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq29 140 7e-28 seq158 107 4e-18 >seq29 Length=315494 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 ||| || |||||||| || || || || ||||| ||||| || | || ||||| ||||| Sbjct 102489 TTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAA 102548 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 ||| | | ||||||||||| || || || || || ||||||||||||| ||| ||||| Sbjct 102549 AATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATT 102608 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | |||||| | ||| || |||| |||||| ||||||||||| | || || || Sbjct 102609 ATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGAC 102668 Query 104548 AAATATCTGCAT 104559 ||| || ||||| Sbjct 102669 AAAGATTTGCAT 102680 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || ||||||||| | ||| | ||| ||| Sbjct 103208 AGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCT 103267 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||||||||| || ||||| | | |||||| |||||||| ||||| || || ||| Sbjct 103268 TCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCC 103327 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||| | || ||||| || | ||| ||||||| || ||||| || ||||||||| Sbjct 103328 TGGATCTTGGACTTAACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTC 103387 Query 104528 TTACCAGT 104535 || || || Sbjct 103388 TTGCCGGT 103395 >seq158 Length=74113 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || || || || || || || || || | ||| ||||||||||| ||||| Sbjct 63160 GTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCTAGTTGCTTTCCG 63219 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||||||||| || || ||||| || || ||||| ||||| | || Sbjct 63220 GCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTG 63279 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || || ||||| || || || || || || || || || Sbjct 63280 ACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTC 63339 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 63340 TTGACGAAGATCTGCAT 63356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151374457030084