Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq158 113 4e-20 seq29 87.8 2e-12 >seq158 Length=74113 Score = 113 bits (124), Expect = 4e-20 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 || ||||||||||| | |||||| |||||||| | ||| |||||| | || || || Sbjct 63142 CGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCG--GAAAGGGTGCGAC 63199 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| || || || |||||| | ||||| |||| || ||||| || ||||| || || | Sbjct 63200 CATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCT 63259 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || | |||||| | ||| ||||| | || || || | |||| Sbjct 63260 TGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGA 63319 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||||| || || || || || || |||||||||||| Sbjct 63320 TGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 63357 >seq29 Length=315494 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG--AATCCT 94856 ||||| || ||||| ||||||||||| | ||| |||| | | ||||| | ||||| Sbjct 102700 ACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAAT--CCGAAAGTGTACGTCCATCCT 102757 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || || || ||||||| | | ||| ||||| || || ||||| || || || | Sbjct 102758 CAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTT 102817 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || |||| ||| || ||| |||||| | || || || | ||||| || | Sbjct 102818 GGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACCTCCAGGGTGATCGTCT 102877 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || || || || |||||||| Sbjct 102878 TTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448282105292280