Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq81 291 1e-73 seq7 154 2e-32 >seq81 Length=155533 Score = 291 bits (322), Expect = 1e-73 Identities = 1313/2061 (64%), Gaps = 41/2061 (2%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 110577 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 110636 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | |||| || |||||||||| || | ||| | ||||| || Sbjct 110637 CCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 110696 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || |||||||| |||||| |||||| ||||| || || | || |||||||||| | Sbjct 110697 TGAATATTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACA 110756 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || || ||| | ||||||||||| ||| || |||| ||| || || |||||| Sbjct 110757 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 110816 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | |||| ||||||||||||||||| || || || | |||||| || | ||| | Sbjct 110817 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGATTCTTCATGTTGTCAGAC 110876 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | || | || | || || || ||||| ||||| |||||||| Sbjct 110877 CAGAGACCCATATCAACAAGGTCTTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 110936 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | | || | || | ||| ||||| || || ||||| | | || || || Sbjct 110937 GCAAGAACACGACGGGAGTAGATATTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGCCA 110996 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471 | |||||| | || ||||| ||||||||||| || | | | |||| | ||| Sbjct 110997 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTTCGGATTCCG 111056 Query 62472 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62531 | | |||| | || | || ||||||| ||| | ||| | ||| ||| Sbjct 111057 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 111116 Query 62532 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 62591 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 111117 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAGGTTTCGTATGGG 111176 Query 62592 CC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62647 || |||||| | | || | | || | | || ||| ||| || ||||| || Sbjct 111177 CCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 111232 Query 62648 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG--A 62705 ||| || | | || || | || ||||| || ||||||||| | ||||| | Sbjct 111233 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGCCA 111291 Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765 | ||| || || || | ||||| || || | | ||||||||| ||| | ||| Sbjct 111292 AGAAA-GCATCAGCAAGACCTTGGACTCCGACAGCGATAGGTCGATGACGGAAATTGCTT 111350 Query 62766 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62825 || || |||| | ||||| || || ||||| ||||| || || | ||||| || Sbjct 111351 CTTCTGGCCTCTGCGACTGGATAGTAGTTGATATCGATAATCTTGTTCAAGTTTCTAACG 111410 Query 62826 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT---AC- 62878 | |||| ||| || || | || || | |||||| | || | ||| || || Sbjct 111411 ACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGACG 111470 Query 62879 AAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 62938 ||| || | || | | || |||| ||||| || ||||||| | | | || Sbjct 111471 AAAGTTGGTAGAG-CGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTA 111529 Query 62939 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACT 62998 | | || || ||||| | ||| | ||||| || | || | ||| ||||| Sbjct 111530 CTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTACT 111589 Query 62999 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 63058 ||| ||||| || |||||||| ||||| ||||| ||| | || || || | || | || Sbjct 111590 CTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGCCTC 111649 Query 63059 TATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT--CTT 63116 | ||||| | ||| | | ||||||| || || ||| | | | || ||| Sbjct 111650 AAGAATCGAGTACCAAAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGCCTT 111706 Query 63117 -TCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 63173 ||||| ||| | | | |||||||| || || |||||| |||| || ||| Sbjct 111707 CTCGTAGCCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAACCTGGA 111764 Query 63174 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63233 ||||| | || ||||| | | ||| || || | | | || || ||||| || ||| Sbjct 111765 CATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGA 111824 Query 63234 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 63293 ||||||||||| | || || ||||| | | | | ||| || || || |||| Sbjct 111825 TCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATTC 111884 Query 63294 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63353 || ||||| |||||| | | || ||| | |||||| ||||||| ||| | || | Sbjct 111885 TTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAAG 111944 Query 63354 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63413 | ||||| || ||||| || || ||||| | ||||| || ||||| || |||||| Sbjct 111945 GCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGG 112004 Query 63414 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCA 63473 | ||| |||| ||||||||| || | ||||||||||||| || || ||| ||||| Sbjct 112005 AGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGCA 112064 Query 63474 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63533 || || | ||| ||||| || || || || | || ||||| | || || Sbjct 112065 CGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATC 112124 Query 63534 TTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63593 || || || || || ||||| || || || || || |||||| | || || || Sbjct 112125 TTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGAT 112184 Query 63594 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 63653 || | ||| | ||| ||||| || | || || ||||| || || || | Sbjct 112185 GAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGTAC 112244 Query 63654 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCC 63712 || | || | | |||||| || || ||||| || ||||| || | ||||| || Sbjct 112245 TTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCG-TGAATACC 112303 Query 63713 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 63772 || || |||||||| | ||| || || || | ||| ||| |||| | | | Sbjct 112304 AACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTTGCCATCAAGACGTAG 112363 Query 63773 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCG 63830 | ||| ||| || | ||| ||||| ||||| || | ||| ||||| ||||| ||| Sbjct 112364 AAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAA--TCTCGGTCG 112421 Query 63831 TAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT 63890 || | ||| | |||||||||| |||| || | | |||| || | || | ||| Sbjct 112422 TAGACAATTGCAGAGTTGAGTTCCTCCTCATGTCTCATAACACATTCGAAAGT-TTCCTT 112480 Query 63891 G-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCAT 63949 | ||| || ||||| | | |||||| | || || ||| | | ||||||| || Sbjct 112481 GCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCGCGGAT 112540 Query 63950 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 64009 || | ||| |||| || |||| ||||| || || || || || || | || || Sbjct 112541 AACGTGCGAGAATTGTTTCTTGGTTTGTTTGTGAAGGTTAGAGACTGCAATACGAGCAGC 112600 Query 64010 TAGAATGGCATAATCCGGATG 64030 ||||||||||||||| ||||| Sbjct 112601 TAGAATGGCATAATCGGGATG 112621 >seq7 Length=635569 Score = 154 bits (170), Expect = 2e-32 Identities = 344/513 (67%), Gaps = 5/513 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||||| || | |||||||| || || || || || |||| || || ||| Sbjct 462329 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTT 462270 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || || |||| | || |||| ||| | ||||| | | Sbjct 462269 TCCATGAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTACCCAAAGCGATGAGG 462210 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | ||| || || ||||| || ||| ||||| | | | ||||| || | ||| Sbjct 462209 AGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAAAGA 462150 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | ||||||||| | || | |||||||| || || || || || || || | Sbjct 462149 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGATGACG 462090 Query 33253 GATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | ||||| || ||| | || || ||| | ||| || | | |||||||| Sbjct 462089 TCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 462031 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 |||| ||| ||||| ||||| | || ||||||||||| || |||||||||| ||| Sbjct 462030 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCAT 461971 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || |||||||| || ||||| || || || ||||| ||||| || ||||| || ||||| Sbjct 461970 GAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTC 461911 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTT 33488 || ||||| || || | ||| | | || | || | | || || ||||| || Sbjct 461910 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 461851 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 |||||| ||||||||||| || | ||||| Sbjct 461850 GACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 461818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622934561958680