Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq29 100 3e-16 seq7 86.0 6e-12 seq158 84.2 2e-11 >seq29 Length=315494 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 || ||||| | ||||| ||||| | ||||| ||||||||||| | || ||| Sbjct 103112 ACCGGAAAGACCATCACTCTCGAAGTCGAATCTTCAGACACCATCGACAACGTTAAATCG 103053 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| || || ||||| || ||||||||||||||| | | || | || |||||| Sbjct 103052 AAGATTCAAGATAAGGAAGGCATCCCTCCCGATCAACAACGTTTGATCTTCGCTGGCAAA 102993 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| ||||||| | | | | | |||||| || || || || || ||||| | || Sbjct 102992 CAACTTGAAGATGGTCGCACCCTTTCCGACTACAATATCCAGAAGGAGTCTACCCTTCAC 102933 Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995 | ||||| |||||| | || || Sbjct 102932 TTAGTCCTCAGACTTCGTGGTGG 102910 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 || ||| |||| | || || | |||||||||||| | || || ||||| ||| Sbjct 103383 ATTACCCTCGAGGTTGAGTCTAGCGACACCATCGACAATGTTAAGTCCAAGATCCAGGAC 103324 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || || || || ||||| || ||||| | | |||| || ||| ||||||||||||||| Sbjct 103323 AAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGAAAACAACTCGAAGAT 103264 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | | | | | || ||||||||||| || || || || ||| ||||||| || || Sbjct 103263 GGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCACTCTCCATCTCGTTCT 103208 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||| | || ||||| |||||||| | || | |||||| Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| || || || || || || ||||||||| Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT-GATAGAAACGTCAGCGACTATAA 26947 ||| | || || | | || || ||||| || ||| || | || | | || || || Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCG-GATTACAA 102730 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||| ||||| ||| | ||| ||||||| Sbjct 102729 CATTCAAAAGGAATCGACTTTACATTTGGTCCT 102697 >seq7 Length=635569 Score = 86.0 bits (94), Expect = 6e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| || || || | ||||| || || || |||||||| | | || ||||| | ||| Sbjct 462324 GTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTTTCCAT 462265 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764 || ||||| || || |||| ||| || ||||||| ||||| ||| | || || Sbjct 462264 GAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTACCCAAAGCGATGAGGAGACG 462205 Query 119765 ATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGAC 119824 ||| || ||||| || ||||||| |||| || ||||||||||| | ||| Sbjct 462204 ATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAAAGAGCACA 462145 Query 119825 CGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || | ||| | ||| ||||| || | || || ||||| ||||| Sbjct 462144 AGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTC 462100 >seq158 Length=74113 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || ||| | |||||| |||| | || || Sbjct 63356 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 63297 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| || || || || ||||||||| Sbjct 63296 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCAA 63237 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || ||| || ||||| ||||||| | | | | | ||| || ||| Sbjct 63236 CAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAAC 63177 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || ||||| || |||||| | || |||| Sbjct 63176 ATCCAAAAGGAGTCTACTCTTCACTTGGT 63148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478652689136560