Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq158 105 6e-18 seq29 86.0 5e-12 >seq158 Length=74113 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || ||| | || ||| |||| || ||| | Sbjct 63356 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 63297 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || || || || ||||||||| Sbjct 63296 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCAA 63237 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | || ||| |||||||| ||||||| | | | | |||||| ||| Sbjct 63236 CAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAAC 63177 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 || ||||| || ||||| |||| || |||||| Sbjct 63176 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTA 63144 >seq29 Length=315494 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 || ||||| | || || |||||||||| | ||||||||||| | || ||| Sbjct 103112 ACCGGAAAGACCATCACTCTCGAAGTCGAATCTTCAGACACCATCGACAACGTTAAATCG 103053 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 |||||| || || |||||||| |||||||||||||| | |||| | || ||||| Sbjct 103052 AAGATTCAAGATAAGGAAGGCATCCCTCCCGATCAACAACGTTTGATCTTCGCTGGCAAA 102993 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 ||||| ||||||| | | | | ||| || || || || || || ||||| |||| Sbjct 102992 CAACTTGAAGATGGTCGCACCCTTTCCGACTACAATATCCAGAAGGAGTCTACCCTTCAC 102933 Query 24195 TTAGT 24199 ||||| Sbjct 102932 TTAGT 102928 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 |||||| |||| || ||| | | |||||||||||| | || || ||||| ||| Sbjct 103383 ATTACCCTCGAGGTTGAGTCTAGCGACACCATCGACAATGTTAAGTCCAAGATCCAGGAC 103324 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || || || ||||| || |||||| | |||||| || ||| || |||||||||||| Sbjct 103323 AAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGAAAACAACTCGAAGAT 103264 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 | | | | || || |||||||| || || || || || Sbjct 103263 GGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCAC 103223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927495731565