Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq264 140 2e-28 seq29 123 2e-23 >seq264 Length=14290 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 10388 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 10329 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 10328 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 10294 >seq29 Length=315494 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | |||||| || | ||||| |||||||||||||||||||| || Sbjct 102453 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGA 102512 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | |||| || || || ||||| ||||| || | ||||||||||| | || Sbjct 102513 AAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGG 102572 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||| || |||||| ||| ||| || ||||| | | |||||| ||| || Sbjct 102573 AATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCAC 102632 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||||| || ||||| || ||||| || || || || ||||| Sbjct 102633 TTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||||||| | ||| ||||||||||| |||||||| | Sbjct 102680 TACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCG 102739 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | |||| | || || | ||| || || ||||| || || ||||||||||||| | Sbjct 102740 AAAGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTG 102799 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || || || || ||| ||| ||||| | || ||| || ||||| Sbjct 102800 GGATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAA 102859 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | || || ||||| |||||||| Sbjct 102860 CCTCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940574639713