Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq29 105 6e-18 >seq29 Length=315494 Score = 105 bits (116), Expect = 6e-18 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || || ||||| | || ||| | |||||||| ||||| Sbjct 102680 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA 102621 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || || || | | | || |||| | ||| ||||| || || ||||||||||| | Sbjct 102620 GATACCATTGA-TAATGTTAAATCAAAGATTCAG-GACAAGGAGGGCATTCCACCTGATC 102563 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | |||||||| || || || || || || | | || | ||||||| Sbjct 102562 AACAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACA 102503 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||||| ||| ||| | || || ||||| Sbjct 102502 ATATTCAAAAGGAAAGCACCTTGCACTTGGTGCT 102469 Score = 102 bits (112), Expect = 7e-17 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AA 25078 ||||||| || | || || |||| || ||||| ||||| ||||| || || || Sbjct 103397 TGACCGGCAAGACTATTACCCTCGAGGTTGAGTCTAGCGACACCATCGA--CAATGTTAA 103340 Query 25079 GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGG 25138 | || ||| ||||| || || ||||| |||||||||||||| | ||||| ||||| Sbjct 103339 GTCCAAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGG 103280 Query 25139 CAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCT 25198 |||||| | ||||||| ||||||| || | || || || || || || || ||||| || Sbjct 103279 AAAACAACTCGAAGATGGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCACTCT 103220 Query 25199 ACATTTAGTGCT 25210 ||| | || || Sbjct 103219 CCATCTCGTTCT 103208 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | ||||| | || || || || || Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| ||| ||| || || || || || ||||| || ||| Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATTACA 25176 || || |||| ||||| || || ||| | || |||| || |||| | | ||||||| Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCG--GATTACA 102731 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | |||||||| ||||| || ||||||| || || Sbjct 102730 ACATTCAAAAGGAATCGACTTTACATTTGGTCCT 102697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433319428636745