Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq7 134 2e-26 >seq7 Length=635569 Score = 134 bits (148), Expect = 2e-26 Identities = 359/534 (67%), Gaps = 20/534 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||| |||||||| || |||||| | ||||| ||||| || ||||| || | Sbjct 462342 CATGACACCGGCCTTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGC 462283 Query 92850 CAAAGATATCGAATTCACT--AGT-GATTGGATTCTTGGCGTTATAATACTTT----TCA 92902 ||| || || | ||| | ||| || ||| || | || ||| ||||| | | Sbjct 462282 CAAGGAGAT-GTTTTCCATGAAGTCGAATGGGTTGGCAGATTTGTAA-ACTTTGTCGTTA 462225 Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 || ||| || | | | |||||| |||||||| ||||| || ||| | | Sbjct 462224 CC---CAAAGCGATGAGGAGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTA 462168 Query 92963 CAATTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTAC 93021 | ||||| || | |||| | ||| || ||||| ||||||||||| |||| ||||||| | Sbjct 462167 GAGTTCATGCCCAAAAGA-GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTC 462109 Query 93022 AACGGCTTCTTTCAAGATTTCTATTACT-CTACTATTTGG-TGGTTTTTGTACGACATAA 93079 |||||||| | | || ||| || || | |||| ||| || || || Sbjct 462108 GACGGCTTCGGTGATGACGTCTTGAACGGCT--TGCTTGGATGGGCGGTGCTTGAGATGG 462051 Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | | | | ||| || || ||||| || | ||||||||| || || || | || ||| Sbjct 462050 GAGAAGAGGAGGCATGCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTG 461991 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| || | || | | || || || ||||||||||| || || || || || Sbjct 461990 GAGAAGGTGAGTCCGGCCATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGAT 461931 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 || || || || |||||||| ||||| || ||||| |||| ||||| ||||| | | | Sbjct 461930 CCGGAGAAGAAAATACCTTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAG 461871 Query 93260 GAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 ||| | || |||||||| | |||||| ||||| || |||||||| ||||| Sbjct 461870 TTCTTA-TCTTGAATCCATTTGACAGCCCAGTCGGCCTTCTTCTTAATGCAAGG 461818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556849502686520