Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq29 143 2e-29 seq158 114 1e-20 seq32 102 7e-17 >seq29 Length=315494 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || ||||| ||||| || | || | ||||||||| | | Sbjct 102680 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA 102621 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||| ||||| ||||||||||| |||||||| |||||| Sbjct 102620 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 102561 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || || ||||| ||||| | | ||| | || |||||||| Sbjct 102560 CAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 102501 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| ||| |||| | || || || Sbjct 102500 ATTCAAAAGGAAAGCACCTTGCACTTGGT 102472 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || ||| |||| || || || ||| | | Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||| || ||||| ||||||||||| |||||||||||| Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || || | |||||| || || | || ||||||||| Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCGGATTACAAC 102729 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| ||||| || ||||||| || Sbjct 102728 ATTCAAAAGGAATCGACTTTACATTTGGT 102700 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| || | ||||| || || ||||||| ||||| ||| | | || ||| | ||| Sbjct 103124 GTTAAGACCCTTACCGGAAAGACCATCACTCTCGAAGTCGAATCTTCAGACACCATCGAC 103065 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 | | ||| || |||||||| ||||| || || || ||||||||||||||| | || Sbjct 103064 AACGTTAAATCGAAGATTCAAGATAAGGAAGGCATCCCTCCCGATCAACAACGTTTGATC 103005 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || || |||||||| | || ||| |||||| | ||||| ||||| || || || || Sbjct 103004 TTCGCTGGCAAACAACTTGAAGATGGTCGCACCCTTTCCGACTACAATATCCAGAAGGAG 102945 Query 22411 TCCACCATACATTTAGT 22427 || ||| | || ||||| Sbjct 102944 TCTACCCTTCACTTAGT 102928 >seq158 Length=74113 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| || || || || | | Sbjct 63356 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 63297 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| ||||||||||||||| Sbjct 63296 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCAA 63237 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| || || |||| ||| |||||| | |||||||||||| Sbjct 63236 CAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAAC 63177 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || || || | || || || || || | || || ||| Sbjct 63176 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGTCTCCGTGGTGGT 63129 >seq32 Length=306211 Score = 102 bits (112), Expect = 7e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || |||| ||| | ||| || |||| Sbjct 242223 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTCAAGTCC 242282 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||||||||||||| | || || || || || Sbjct 242283 AAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTGATCTTCGCTGGAAAG 242342 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || || |||| ||||||||||| ||||| Sbjct 242343 CAATTGGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAA 242386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419719697648995