Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq158 206 5e-48
seq29 161 2e-34
seq32 143 5e-29
>seq158
Length=74113
Score = 206 bits (228), Expect = 5e-48
Identities = 182/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || || |||||||| || || ||||| ||||||||||| ||||||||
Sbjct 63130 CCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 63189
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||||| ||||| |||||||| || | || ||||| |||||||||
Sbjct 63190 AGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGA 63249
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 63250 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 63309
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||||||| |||||||||||||||||||| ||||||||
Sbjct 63310 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356
>seq29
Length=315494
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||| |||| || || || ||||| ||||| ||||| ||
Sbjct 102682 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 102741
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | ||||| || | ||||| || || || || || | |||||| ||||||||
Sbjct 102742 AGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 102801
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||| ||||||| ||| || ||||| ||||| | |||||| ||
Sbjct 102802 ATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACC 102861
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||| || ||||| || || ||||||||||| ||||||||
Sbjct 102862 TCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908
Score = 156 bits (172), Expect = 8e-33
Identities = 167/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | | || ||||| || || ||||| || ||||| || || |||||
Sbjct 102910 CCACCACGAAGTCTGAGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 102969
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | || || || ||||| || | | |||||| ||||| ||
Sbjct 102970 AGGGTGCGACCATCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGG 103029
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| ||||||||||| | || ||| ||||||||||||| ||||| |||
Sbjct 103030 ATGCCTTCCTTATCTTGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACT 103089
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455
|| | |||||||| ||||| || |||||||| |||| |||
Sbjct 103090 TCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGACTAT 103130
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| | ||| || ||||| || || ||||| ||
Sbjct 102454 CCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAA 102513
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || || || || || |||||||| || || || || | || |||||| || ||||||
Sbjct 102514 AGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGA 102573
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||||| || || || ||||| |||| ||||| |||
Sbjct 102574 ATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACT 102633
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || || || || || | ||||||||| || || |||||
Sbjct 102634 TCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680
Score = 95.1 bits (104), Expect = 2e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | || || |||||||| || ||||||||||| ||
Sbjct 103193 CCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTC 103252
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| | || || |||||||| || | | |||||||| || |||
Sbjct 103253 AAAGTGCGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGA 103312
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| || ||||| | ||| || ||||||||||| ||| || || ||
Sbjct 103313 ATTCCCTCCTTGTCCTGGATCTTGGACTTAACATTGTCGATGGTGTC-GCTAGACTCAAC 103371
Query 68414 TTCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||| || || || || ||
Sbjct 103372 CTCGAGGGTAATAGTCTTGCCGGT 103395
>seq32
Length=306211
Score = 143 bits (158), Expect = 5e-29
Identities = 149/193 (77%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||||||||| ||||| ||||| || | || || || || ||||| || ||||| ||
Sbjct 242386 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGATC 242327
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| | |||||| ||||| ||||| || |||||||| || ||||| | |||||| |||
Sbjct 242326 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 242267
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA- 68452
|||||||| | || || || || | ||||||||| || ||||| ||||||||||||||
Sbjct 242266 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAG 242207
Query 68453 -TATCTGCATTAT 68464
||| | ||||||
Sbjct 242206 CTAT-TACATTAT 242195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921603702585560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |