Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq29 127 2e-24 seq158 104 2e-17 >seq29 Length=315494 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||||| || ||||| ||||||||||||||||| Sbjct 102679 ATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCC 102738 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| |||||||| |||||||| |||| ||||| ||||| || || Sbjct 102739 GAAAGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGT 102798 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || |||||| |||| | || | ||||| | ||||| Sbjct 102799 GGGATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCA 102858 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||| || ||||| || || || || ||||||||||| Sbjct 102859 ACCTCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| ||||| | ||||| || | ||||| || || || || ||||| ||| Sbjct 102907 ATACCACCACGAAGTCTGAGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCG 102966 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||||||||||||| |||||| |||| | ||| ||||| || ||| Sbjct 102967 GAAAGGGTGCGACCATCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGA 103026 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| || || |||||| ||| | | || | |||||| | |||||| Sbjct 103027 GGGATGCCTTCCTTATCTTGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCG 103086 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | || | || || ||||| || || || || Sbjct 103087 ACTTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAAC 103124 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | ||| | || || || || || ||||| || || Sbjct 103190 ATACCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCA 103249 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||| ||| |||||| |||||||| || ||| | || | |||||||||||| ||| Sbjct 103250 CTCAAAGTGCGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGA 103309 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | || | ||||||| | || || Sbjct 103310 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTAACATTGTCGATGGTGTCGCTAGACTCA 103369 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || |||||||||| Sbjct 103370 ACCTCGAGGGTAATAGTCTTGCCGGTCA 103397 >seq158 Length=74113 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || || || || | ||||| || ||||| |||||||||||| Sbjct 63129 ACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGA 63188 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || ||| |||||| ||||| || || ||| |||| | |||||||| || || || Sbjct 63189 AAGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGG 63248 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | || | |||||| | || || || Sbjct 63249 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAAC 63308 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || | ||| | |||||||| || || || || || || ||||||||| || Sbjct 63309 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 63360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420126089610276