Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq7 201 2e-46 seq81 125 1e-23 >seq7 Length=635569 Score = 201 bits (222), Expect = 2e-46 Identities = 361/516 (70%), Gaps = 11/516 (2%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT-CGAGAGTCCCGACGCAAC 42691 || ||||| ||||||||||| |||||||| |||| ||||| | ||| | || | || Sbjct 461818 CCTTGCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGA-TAAGAACTCCAC 461876 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | ||||| || || || |||||||| || |||| Sbjct 461877 CTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTT 461936 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 ||| || ||||||||||||||| || ||| || ||| |||||||||||||||| |||| Sbjct 461937 CGCATCTATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGGCCGGACTCACCTTCTCCAACG 461995 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||||||| | | ||||| || || || | || || || |||||||| ||||| || Sbjct 461996 AACTCATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTC---CC 462052 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| |||| || || ||| | || | | | ||||||| || ||||| || | Sbjct 462053 ATCTCAAGCACCGCCCATCCAAGCAAGCCGTTCAAGACGTCATCACCGAAGCCGTCGAAA 462112 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989 ||||| | || ||| | || || | || || ||| | || | ||||||||| | Sbjct 462113 TCGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTG-CTCTTTTGGGCATGAACTCTACC 462171 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048 |||||| |||| ||||| | | || || || | |||||| | ||||| | Sbjct 462172 CTCATGAAGCAA-TACATTGAATTTGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGA 462230 Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | | ||||| | | ||| |||||||| ||||| |||||||| |||| ||||| Sbjct 462231 CAAAGTTTACAAATCTGCCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCCGGCAA 462290 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||| ||||| ||| | || | || ||||| Sbjct 462291 GACCAACTTCTTCGAAAAGAGAGTTGGTGATTACCA 462326 >seq81 Length=155533 Score = 125 bits (138), Expect = 1e-23 Identities = 441/680 (65%), Gaps = 9/680 (1%) Strand=Plus/Plus Query 244723 GTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATT 244782 ||||| |||||| || ||||| | || || || || ||||||| || || || Sbjct 111527 GTACTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTT 111586 Query 244783 GGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGC 244842 ||| |||||| || |||||||| |||||||| || ||||||||| || || Sbjct 111587 ACTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGC 111646 Query 244843 GACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGC 244902 | || | || ||| || | |||||||| ||| ||||| ||||||| | Sbjct 111647 CTCAAGAATCGAGTACCAAAGCTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCTGCCTT 111706 Query 244903 CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA 244962 |||||||| ||| || ||||||||||| ||| | || || | | || || || Sbjct 111707 CTCGTAGCCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAACCTGGACA 111766 Query 244963 --CGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGG 245020 || | |||||||||||| |||| || || | | || | || |||||| || Sbjct 111767 TTCGTTG--GGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGA 111824 Query 245021 TCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTC 245080 || || ||||| | ||| | |||||| || | | | || ||| ||| ||| Sbjct 111825 TCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATTC 111884 Query 245081 TTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGG 245140 || | || || | || || || || || | ||||| || |||| ||| ||||| | | Sbjct 111885 TTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAAG 111944 Query 245141 GCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGC 245198 || || || |||||||| || || || | || ||| ||| | || | |||||| | | Sbjct 111945 GCACCAGGACGCTTGTTACCACCTTGAT-CAACAT-ATCTGGCAGTGTTGTTGAAAACTC 112002 Query 245199 GCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGC 245258 | || |||| || || ||||| || | || ||||| || ||||| || || || Sbjct 112003 GGAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGG 112062 Query 245259 CCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGC 245318 | | || || ||| | || | || ||||| | ||| ||||| | || || Sbjct 112063 CACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAA 112122 Query 245319 TCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGG 245378 |||| | || || || || || || |||||| |||||||| || || ||||| | Sbjct 112123 TCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATG 112182 Query 245379 AGGACAGCTGGGGCTTGGGG 245398 | || || | | ||||| || Sbjct 112183 ATGAAAG-TTGTGCTTGTGG 112201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944320041718480