Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq29 125 2e-23 seq158 123 6e-23 seq32 113 1e-19 seq23 87.8 4e-12 seq7 87.8 4e-12 >seq29 Length=315494 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||| | || ||| ||||| || || || || | Sbjct 102682 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 102741 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| || || | ||| || || || ||||| ||||| |||||| |||| Sbjct 102742 AGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 102801 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||| ||||| || | || || || || |||| || ||||| || Sbjct 102802 ATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACC 102861 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 102862 TCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 >seq158 Length=74113 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || |||| || ||||| || ||||||| ||| ||||| |||||| Sbjct 63166 TCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAG 63225 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||||||| ||| ||||| || || |||||||| || | || || || Sbjct 63226 ATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 63285 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| || || || || || ||||||||| Sbjct 63286 TCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACG 63345 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 63346 AAGATCTGCAT 63356 >seq32 Length=306211 Score = 113 bits (124), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 |||||||| || || || | ||| || |||||||| || ||||| ||||| ||||||||| Sbjct 242386 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGATC 242327 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 | ||| |||||| || ||||| || || |||||||| || | || || || || Sbjct 242326 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 242267 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA- 288464 || | ||| || || || || || ||||| ||||| || || || ||||||||||| Sbjct 242266 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAG 242207 Query 288465 -TATCTGCATTAT 288476 ||| | |||||| Sbjct 242206 CTAT-TACATTAT 242195 >seq23 Length=365734 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 325391 CAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGA 325450 || |||| |||||| || ||||||| ||||| ||| || |||||| ||||| Sbjct 62529 CAATTGACGTTATTCGAACCAACATAATTTTGTGCGAGGCCAACAATGGTCATTTGCATT 62470 Query 325451 GATGCTTCGCCATGGTGATAGGCGCTATGCT---CTGCAACGTAACCGCTGAACTGTGCA 325507 || |||||||||||||||||||| | | || ||| || ||||| | | || Sbjct 62469 GAAGCTTCGCCATGGTGATAGGC-CGAGACTTGACTG--ACATAACCAGCAAGTTCAACA 62413 Query 325508 ACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAA 325567 ||||||| || | || | ||||||||||| | ||| || ||||||| ||| | Sbjct 62412 ACCTTCATATCATTTGTAAGGTTGCGCTTGAAGCAAGCATACATAACTTTCCTTTGTCCA 62353 Query 325568 GGTTTGAAACCATCAACGACCGACGGAATG 325597 ||||||| ||| || | ||| || |||||| Sbjct 62352 GGTTTGAGACCGTCGATGACAGAGGGAATG 62323 >seq7 Length=635569 Score = 87.8 bits (96), Expect = 4e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 269170 CTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAG 269229 |||||||| ||||| || ||||| || ||||||||| || ||| || | ||| | || Sbjct 462172 CTCATGAAGCAATACATTGAATTTGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGAC 462231 Query 269230 AAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAG 269289 ||||| ||||| || || || |||| ||| |||||| || || | | || ||| Sbjct 462232 AAAGTTTACAAATCTGCCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCCGGCAAG 462291 Query 269290 ACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAA 269325 || ||||||||||||||| | || | || || ||| Sbjct 462292 ACCAACTTCTTCGAAAAGAGAGTTGGTGATTACCAA 462327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179629869455394