Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq7 111 3e-19 seq23 93.3 9e-14 seq83 89.7 1e-12 >seq7 Length=635569 Score = 111 bits (122), Expect = 3e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGC 243562 ||||||| ||||| || |||| ||| | |||||| | ||| ||| |||| || | Sbjct 462092 TCATCACCGAAGCCGTCGAAATCGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTC 462151 Query 243563 TTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTT 243622 || | |||||||||||| |||||| || ||||| ||||| || || || || | Sbjct 462152 TTTTGGGCATGAACTCTACCCTCATGAAGCAATACATTGAATTTGTTGCTGATCGTCTCC 462211 Query 243623 TCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGC 243682 ||||||| | ||| | || ||||| ||||| || ||||| || | ||| ||||| Sbjct 462212 TCATCGCTTTGGGTAACGACAAAGTTTACAAATCTGCCAACCCATTCGACTTCATGGAAA 462271 Query 243683 TCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 ||| || | || || || ||||||||||||||| | || ||||||| ||| Sbjct 462272 ACATCTCCTTGGCCGGCAAGACCAACTTCTTCGAAAAGAGAGTTGGTGATTACCAA 462327 >seq23 Length=365734 Score = 93.3 bits (102), Expect = 9e-14 Identities = 197/291 (68%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 297490 ||| |||| |||||||| || || || || ||| | || ||||| | ||| ||| Sbjct 62610 AGTCTTGTAAAAATATAACGGGCGCTAGCAGCATCGCTTCCTCCCTGAAGTCTACTACCA 62551 Query 297491 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 297550 || | || ||| | || |||| |||||| || ||||||| ||||| ||| Sbjct 62550 AAATTTCCACTTGGCTCGAGACAATTGACGTTATTCGAACCAACATAATTTTGTGCGAGG 62491 Query 297551 TTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCT---CTGCA 297607 || |||||| ||||| || |||||||||||||||||||| | | || ||| Sbjct 62490 CCAACAATGGTCATTTGCATTGAAGCTTCGCCATGGTGATAGGC-CGAGACTTGACTG-- 62434 Query 297608 ACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAA 297667 || ||||| | | ||||||||| || | || | ||||||||||| | | Sbjct 62433 ACATAACCAGCAAGTTCAACAACCTTCATATCATTTGTAAGGTTGCGCTTGAAGCAAGCA 62374 Query 297668 TATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATG 297718 || || ||||||| ||| |||||||| ||| || | ||| || |||||| Sbjct 62373 TACATAACTTTCCTTTGTCCAGGTTTGAGACCGTCGATGACAGAGGGAATG 62323 >seq83 Length=151564 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 334136 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 334195 |||||||||||| || ||| | |||| || | || | |||||| || |||| Sbjct 81837 GTCGAGATCGTGCTCAACGAACACAGTCTTGACCTCACTCTTCTTGGGGAAACCCTCAAC 81896 Query 334196 CTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAG 334255 || |||| |||||| ||||| ||||| || || || | ||||| || || || || Sbjct 81897 TTGCTCGTTGTTAATAGCACGCATGAGAGTAGACTTTCCGGAACCGTTAGGACCGCAAAG 81956 Query 334256 ACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACC 334315 ||| || || | |||||||| ||| || | || ||||| |||||||| || |||| Sbjct 81957 ACCATATCGTTGACCACGCTTGAGACGGAGATGGGTGTTGTTAAGAAGAATCTTGGCACC 82016 Query 334316 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| || ||||| || |||||||| || Sbjct 82017 GTATGCCAAGTTGAAGGTACAATTGCAAAGATCCTCGCC 82055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102857065955050