Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq158 165 8e-36 seq29 104 2e-17 seq32 86.0 6e-12 >seq158 Length=74113 Score = 165 bits (182), Expect = 8e-36 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || |||||||| || | |||||||| ||||| || ||||||||| Sbjct 63130 CCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 63189 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| ||||| || ||||| ||| ||||||||||||| |||||||| || Sbjct 63190 AGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGA 63249 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| |||||||| | ||| || Sbjct 63250 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 63309 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| ||| | |||||||| || || || || || || ||||||||| || Sbjct 63310 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 63360 >seq29 Length=315494 Score = 104 bits (114), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || |||||||| ||| | |||||| ||| || || ||||| ||| Sbjct 102940 GTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCATCTTCAAGTTGTTTGCCA 102999 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| || || ||||||||||| ||||| ||||| || || ||| || Sbjct 103000 GCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTATCTTGAATCTTCGATTTA 103059 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | | |||||||||| || | || || ||||| || || Sbjct 103060 ACGTTG-TCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATGGTCTTTCCGGTAAGGGT 103118 Query 127096 TTTTAC 127101 || || Sbjct 103119 CTTAAC 103124 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || || | || |||||| ||| || || |||||||| Sbjct 103223 GTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCTTCGAGTTGTTTTCCG 103282 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | ||||| ||||| || || ||||| || |||||||||||| ||| || ||| Sbjct 103283 GCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTA 103342 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091 | | |||| |||||| || ||| || |||| ||| | || |||||||||| Sbjct 103343 ACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCA 103397 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||||| || || || |||||||| |||||||| Sbjct 102682 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 102741 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || || ||||| |||| | || || |||||||| || Sbjct 102742 AGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 102801 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || ||| || ||| | | |||| ||||||| || || Sbjct 102802 ATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACC 102861 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| || ||||| || || || || ||||||||||| Sbjct 102862 TCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 >seq32 Length=306211 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 126968 TGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATT 127027 || ||||||||| ||||||| || || ||||||||||| || |||||||||||| ||| Sbjct 242344 TGCTTTCCAGCGAAGATCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATC 242285 Query 127028 TTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 || ||||| | |||| |||||| | |||||| || | ||| | || ||||| Sbjct 242284 TTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCC 242225 Query 127088 GTCAGAGTTTTTACAAA 127104 || || || || || || Sbjct 242224 GTAAGGGTCTTGACGAA 242208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475491153277520