Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq158 165 8e-36
seq29 104 2e-17
seq32 86.0 6e-12
>seq158
Length=74113
Score = 165 bits (182), Expect = 8e-36
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || |||||||| || | |||||||| ||||| || |||||||||
Sbjct 63130 CCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 63189
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| ||||| || ||||| ||| ||||||||||||| |||||||| ||
Sbjct 63190 AGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGA 63249
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||||| | |||| |||||||| | ||| ||
Sbjct 63250 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 63309
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|||| ||| | |||||||| || || || || || || ||||||||| ||
Sbjct 63310 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 63360
>seq29
Length=315494
Score = 104 bits (114), Expect = 2e-17
Identities = 136/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || || |||||||| ||| | |||||| ||| || || ||||| |||
Sbjct 102940 GTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCATCTTCAAGTTGTTTGCCA 102999
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| ||||||| || || ||||||||||| ||||| ||||| || || ||| ||
Sbjct 103000 GCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTATCTTGAATCTTCGATTTA 103059
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| |||||| | | |||||||||| || | || || ||||| || ||
Sbjct 103060 ACGTTG-TCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATGGTCTTTCCGGTAAGGGT 103118
Query 127096 TTTTAC 127101
|| ||
Sbjct 103119 CTTAAC 103124
Score = 100 bits (110), Expect = 3e-16
Identities = 127/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || || || || | || |||||| ||| || || ||||||||
Sbjct 103223 GTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCTTCGAGTTGTTTTCCG 103282
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | ||||| ||||| || || ||||| || |||||||||||| ||| || |||
Sbjct 103283 GCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTA 103342
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091
| | |||| |||||| || ||| || |||| ||| | || ||||||||||
Sbjct 103343 ACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCA 103397
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||||||| || || || |||||||| ||||||||
Sbjct 102682 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 102741
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || || || || ||||| |||| | || || |||||||| ||
Sbjct 102742 AGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 102801
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||| || ||| || ||| | | |||| ||||||| || ||
Sbjct 102802 ATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACC 102861
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | ||| || ||||| || || || || |||||||||||
Sbjct 102862 TCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908
>seq32
Length=306211
Score = 86.0 bits (94), Expect = 6e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 126968 TGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATT 127027
|| ||||||||| ||||||| || || ||||||||||| || |||||||||||| |||
Sbjct 242344 TGCTTTCCAGCGAAGATCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATC 242285
Query 127028 TTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087
|| ||||| | |||| |||||| | |||||| || | ||| | || |||||
Sbjct 242284 TTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCC 242225
Query 127088 GTCAGAGTTTTTACAAA 127104
|| || || || || ||
Sbjct 242224 GTAAGGGTCTTGACGAA 242208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475491153277520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |