Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq81 168 8e-37 seq7 105 8e-18 >seq81 Length=155533 Score = 168 bits (186), Expect = 8e-37 Identities = 1099/1740 (63%), Gaps = 47/1740 (3%) Strand=Plus/Plus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 110616 TAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTTG 110675 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||| ||| | |||| | ||||| ||| |||||||| ||||| || Sbjct 110676 CCCATTGTAGGATCCTTCATGTGAATATTCATTGATTGAGATTGATCAATGAATGCACCA 110735 Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 115741 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 110736 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 110793 Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA 115801 | ||| || ||| |||| |||| ||||||||| || || ||||| | | | Sbjct 110794 GAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCAGCAATGA 110853 Query 115802 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCT 115861 | ||| |||||| | | ||||||||||| || | || || | | || Sbjct 110854 TACGATTCTTCATGTTGTCAGACCAGAGACCCATATCAACAAGGTCTTTGAGAAGCCATG 110913 Query 115862 TATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATG 115921 || || || || || || || || || | ||||| || | ||||| | Sbjct 110914 GGTTAACGACTTGGAATTCTCCGGCAAGAACACGACGGGAGTAGATATTTGAAGTGTAAG 110973 Query 115922 GCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATGGGTGCC 115980 | || || || || ||| | |||||| |||||| |||| || || ||||| ||||| Sbjct 110974 GTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCA 111032 Query 115981 ATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCG 116040 | || || ||| |||| || | | ||| || ||| | | |||||| || Sbjct 111033 ACTAGGAGAGAGTTTCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCC 111092 Query 116041 TAGT--TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTG 116098 | | || | || | ||| |||||||||| | || || ||| | || ||| Sbjct 111093 CACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAGAGACTG 111150 Query 116099 GCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGA 116158 | || || | | | || || |||||||| ||| || | ||| | | | Sbjct 111151 GGGAACCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGGTCA 111210 Query 116159 GGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 116218 ||| ||||| || || ||||| ||||| | || | ||||| || ||| | Sbjct 111211 AGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGT 111270 Query 116219 CAAACGCGAGACGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277 |||| | ||||| | || ||| |||| || ||||||||||| |||| | || Sbjct 111271 CAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGGACTCCGACAGCGATA 111329 Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGAT 116336 || ||||| | | ||| ||| || ||| | || ||||| | || ||||||| Sbjct 111330 GGTCGATGACGGAAATTGCTTCTTCTGGCC-TCTGCGACTGGATAGTAGTTGATATCGAT 111388 Query 116337 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 116396 || | | || | ||| | |||||| | | || |||||||||| | ||||| | Sbjct 111389 AATCTTGTTCAAGTTTCTAACGACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATA 111448 Query 116397 ACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 116453 | | | ||| ||||| |||| | | || || ||||| || |||| ||||| Sbjct 111449 AGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCGATGGAAGCCAAGTTACAGCA 111505 Query 116454 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAAT 116513 || |||||| ||| |||||| | |||||| || |||||||| || || ||| Sbjct 111506 AGCAACCTCATCTGGTGCAGAGTACTCGACAATTTCTGTGCACAAATTGGAGCTGCGAAT 111565 Query 116514 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGG 116573 || |||| ||||||||| || ||| |||| || ||||||||||| ||||| | || Sbjct 111566 AGTACCCAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGG 111625 Query 116574 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG 116632 | || ||||| ||||| | || ||||| | | ||| | | | | | || | | || Sbjct 111626 ATTTCCGGTCTCGGTTTGTGCCTCAAGAATCGAGTACCAAAGCTTTTGAGCCTTG-ATAG 111684 Query 116633 TGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTT 116686 | ||| || |||| ||| |||||| |||||| ||||| ||||| | Sbjct 111685 T---CTTG---CGACCCTTGCCTGCCTTCTCGTAGCCCTCGTAGAGAGCCTCGAACTCCT 111738 Query 116687 CACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746 | || | | |||| | ||||| | | || || | ||||| ||| | ||| Sbjct 111739 CGCCATAAACATCTGCCAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCAT 111798 Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 116806 || ||||| ||||||||||| || || || ||||| | || |||||||||| || Sbjct 111799 TCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTG 111858 Query 116807 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 116866 ||| ||||||| | || ||||| || | || | || || | | |||||| | Sbjct 111859 CACGAACTTCTTCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCCGCAT 111918 Query 116867 GCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTA 116920 |||| ||||||||||| || || | | || | |||| |||| | || | | Sbjct 111919 GCCATGGTTCCAGGTAAACAGCAAAGGCACCAGGACGCTTG---TTACCACCTTGATCAA 111975 Query 116921 CATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCAT 116980 |||| || || || ||| || || || ||||| |||| ||||| | || | |||| Sbjct 111976 CATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAATTTCCAT 112035 Query 116981 TTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCC 117039 | || || ||| | || | |||| | || ||| |||| | ||||||||| Sbjct 112036 TGGTACCGGCAATGTATGCACCAG-TGGCACGGATTCTGTGAATGTTGAGACCAATACCA 112094 Query 117040 CCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 117099 || || ||||||||| || || | | | | | |||| || ||||| || | Sbjct 112095 CCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTG 112154 Query 117100 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTG 117159 || |||| | |||| |||||||| || | ||||| ||| ||||| ||| | Sbjct 112155 TCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCGGAG 112214 Query 117160 AAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAA 117218 ||||| ||||| | || || |||| ||| | | |||||| || ||| || || | Sbjct 112215 AAGAGTGTTGGCGAAGCATGTGTGAA-GTACTTGTTTGACATCAAATTGTATGTTTCGAT 112273 Query 117219 GACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 || || || || ||||||||||| | | || ||||| | ||| | ||| || Sbjct 112274 AGCACTCTCGATATCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTGG 112333 >seq7 Length=635569 Score = 105 bits (116), Expect = 8e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||| |||||||||||||||||||| || |||||| || || | ||||||||| Sbjct 462024 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATGAGACC 461965 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || || |||||||| || || || || Sbjct 461964 ACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGC 461905 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCAT 127707 ||||| || | ||||| | ||||||| ||| || |||| || ||| || | Sbjct 461904 AGCGAATGCGACAAGACGTTGAGCAAAGG---TGGAGTTCTTATCTTGAATCCATTTGAC 461848 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||||| | ||||| |||| || || || || Sbjct 461847 AGCCCAGTCGGCCTTCTTCTTAATGCAAGGAAC 461815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613494753472680