Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq158 129 6e-25 seq7 116 4e-21 seq32 102 8e-17 seq29 89.7 5e-13 >seq158 Length=74113 Score = 129 bits (142), Expect = 6e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||||||||||||| |||| || ||| | | Sbjct 63356 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 63297 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||||||||| |||| ||| Sbjct 63296 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCAA 63237 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || || || || || | |||||||| ||| |||||| Sbjct 63236 CAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAAC 63177 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| | || || || |||||| | ||| Sbjct 63176 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGT 63141 >seq7 Length=635569 Score = 116 bits (128), Expect = 4e-21 Identities = 191/275 (69%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || ||||||||||| || || |||| ||||| | ||||||||| |||||| || Sbjct 461711 TATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGGAAA 461652 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || ||||| | ||| ||||| | ||| ||||| || | || Sbjct 461651 CCGTAGAAGCATCGTGCCTCTGGAATCTGAACTTCACCACTGAATCGCTCAACTAAGTTC 461592 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 ||||||||||| ||||| |||||||| || || || ||||| ||||| | ||| Sbjct 461591 TCGTTGACGATTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAAATGAAGTAACGC 461532 Query 133348 TCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| || || | | | ||||||| | ||||| || | || | ||| || Sbjct 461531 TCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGATAAATCAATCTCTTCT 461472 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || ||||| || || |||||||| Sbjct 461471 GCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACAT 461437 Score = 95.1 bits (104), Expect = 1e-14 Identities = 336/510 (66%), Gaps = 15/510 (3%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| || || || || | || || || || || || || || ||||||| ||| Sbjct 462329 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTT 462270 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT---CAGGTCGACG 132720 ||| || || || |||||||| | ||||| ||| || || | || ||| | Sbjct 462269 TCCATGAAGTCGAATGGGTTGGCAGATTTGTAAA-CTTTGT--CGTTACCCAAAGCGATG 462213 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 || || | || || || || || ||||||||| |||| | | | | || | |||| Sbjct 462212 AGGAGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAG-AGTTCATGCCCAA 462154 Query 132780 CAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 ||| |||| || || || ||||| | || ||||||||| |||| || ||||||| Sbjct 462153 AAGA-GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGA 462095 Query 132839 CGATTTCCCTAACG-CGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAA 132897 || || |||| | || | | ||| || || | ||| ||| | | ||| Sbjct 462094 TGACGTCTTGAACGGCTTGCTTGGATGGGCGGT-GCTTGAGATGGGAGAAGAGGAGGCAT 462036 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || || ||| || | || ||||| | ||| |||||||||||| ||| || | ||| Sbjct 462035 GCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCG 461976 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 | |||||| || || || |||||||| || || | ||||| || || ||||| | Sbjct 461975 GCCATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATA 461916 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGCGAT 133076 || || ||||| ||||| || || || || | | || |||| ||||| || | || Sbjct 461915 CCTTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTG-AAT 461857 Query 133077 CCAGCGCAGCGCCCATTCGGCCTT-TTCTT 133105 ||| | ||||| |||||||| ||||| Sbjct 461856 CCATTTGACAGCCCAGTCGGCCTTCTTCTT 461827 >seq32 Length=306211 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || |||||| | | Sbjct 242208 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 242267 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||||||||| |||| ||||| || | Sbjct 242268 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 242327 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || |||| |||| || || ||| || ||||||||||||||| Sbjct 242328 ATCTTCGCTGGAAAGCAATTGGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 242387 Query 38433 G 38433 | Sbjct 242388 G 242388 >seq29 Length=315494 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| || || ||| |||| || ||| | | ||||| | | | | |||| Sbjct 103395 ACCGGCAAGACTATTACCCTCGAGGTTGAGTCTAGCGACACCATCGACAATGTTAAGTCC 103336 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||||||||| | ||||||||||| | |||| ||| || ||| Sbjct 103335 AAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGAAAA 103276 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 || || || || | ||||| | | ||||| |||||||| ||||| | || || ||| Sbjct 103275 CAACTCGAAGATGGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCACTCTCCAT 103216 Query 38448 TTGGTGCTGCGT 38459 | || || ||| Sbjct 103215 CTCGTTCTCCGT 103204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500162652744320