Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq29 140 1e-27 seq32 91.5 6e-13 >seq29 Length=315494 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 391033 CAATATATTATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTC 391092 || ||||| ||| || || | || ||||||| || || || || || || || |||| Sbjct 103153 CATTATATCATACTAATATCATCATAGTCGTTAAGACCCTTACCGGAAAGACCATCACTC 103094 Query 391093 TTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAG 391152 | || || ||||| || || | ||| || ||||| || |||||||||||||||| Sbjct 103093 TCGAAGTCGAATCTTCAGACACCATCGACAACGTTAAATCGAAGATTCAAGATAAGGAAG 103034 Query 391153 GAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA 391212 | || ||||| |||||||||||||| || ||| | || ||||||||||||||||| | | Sbjct 103033 GCATCCCTCCCGATCAACAACGTTTGATCTTCGCTGGCAAACAACTTGAAGATGGTCGCA 102974 Query 391213 CTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 | | | || || ||||| | ||||| | || ||||||||||| | ||||| Sbjct 102973 CCCTTTCCGACTACAATATCCAGAAGGAGTCTACCCTTCACTTAGTCCTCAGACT 102919 Score = 120 bits (132), Expect = 1e-21 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || | |||||||| || ||||| | || || ||||| || Sbjct 102680 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA 102621 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | ||||| ||| ||||| || ||||| || ||||| ||||||||| Sbjct 102620 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 102561 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || ||||| |||| || || | || || || ||||| | ||||||| ||| Sbjct 102560 CAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 102501 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 102500 ATTCAAAAGGA 102490 Score = 111 bits (122), Expect = 6e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || ||||| || || || || || || || || ||||||||||| Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||| || ||||||||||| || || || || |||||| Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || |||||||| |||||| | || | ||||||| || Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCGGATTACAAC 102729 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 102728 ATTCAAAAGGA 102718 Score = 102 bits (112), Expect = 3e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 391072 TGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAAC 391131 |||| || || |||||||| || || ||||| || || | ||| || | |||| Sbjct 103397 TGACCGGCAAGACTATTACCCTCGAGGTTGAGTCTAGCGACACCATCGACAATGTTAAGT 103338 Query 391132 AAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGA 391191 || || || || ||||| |||||||||||||| ||||| ||||| |||||| | || | Sbjct 103337 CCAAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGAA 103278 Query 391192 AACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGA 391240 ||||||| |||||||| | |||||| || ||||| || | ||||| Sbjct 103277 AACAACTCGAAGATGGTCGCACTTTGAGTGACTATAACATCCAGAAGGA 103229 >seq32 Length=306211 Score = 91.5 bits (100), Expect = 6e-13 Identities = 139/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 391044 ATTATAATG-AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGA 391102 || |||||| |||| ||||| || || || || || || || || || ||||| || || Sbjct 242192 ATGATAATGTAATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGA 242251 Query 391103 ATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCC 391162 || || || | ||| || | | || || || || || ||||| ||||||||||| Sbjct 242252 GTCCTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCC 242311 Query 391163 TGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGA 391222 |||||||||||||| || ||| | || || ||| | || || ||| | ||| | | || Sbjct 242312 CGATCAACAACGTTTGATCTTCGCTGGAAAGCAATTGGAGGACGGACGTACTCTCTCAGA 242371 Query 391223 TTATAATATTGATAAGG 391239 ||| || || | |||| Sbjct 242372 TTACAACATCCAAAAGG 242388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975677315553284