Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq29 141 7e-28 seq4 120 2e-21 seq23 98.7 8e-15 seq54 91.5 1e-12 >seq29 Length=315494 Score = 141 bits (156), Expect = 7e-28 Identities = 455/701 (65%), Gaps = 10/701 (1%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 |||||||| || || || || ||||| ||||| | ||||| || | || | | | || Sbjct 24965 ACAAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTATCACCAGCGGTGGATTTGACC 24906 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | || | || || || | | ||| |||| ||||| ||||| ||||| | ||| Sbjct 24905 TCAAAGATACCCTCCTCGATGGTCAAGAGAGAGACATCGAAAGTTCCTCCACCAAGATCG 24846 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || || || || || | ||| || |||| ||||| Sbjct 24845 AAGATGAGAACGTTACGCTCACCCTCGATCTTCTTGTCCAAACCGTAAGCAATGGCAGCT 24786 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || || ||||| || || | | ||| |||||||||||||| || || || || Sbjct 24785 GCGGTAGGCTCATTGATGATACGAAGAACGTTAAGACCAGCAATGAGACCAGCGTCCTTG 24726 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || ||||| | ||||||||| | || || || || || || | ||||| | | || Sbjct 24725 GTAGCTTGACGTTGTGAATCTGTGAAGTAAGCTGGGACTGTGACGACGGCGTTGTTAACA 24666 Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374 | ||| | ||||| || || | | |||| || || ||||| || || ||| Sbjct 24665 GTTGCACCGAGGTAAGCCTCAGCGGTCTCTCTCATCTTGACCAAGATCATGGAAGAGATT 24606 Query 518375 TGTTCTGGGGAATATTGCTTGGATTCATT---TTGATATGATACTTCAAAATATGGTTTA 518431 | |||||| | |||| ||| ||| | |||| | || |||| ||| || Sbjct 24605 TCTTCTGGTGTGAATTGTTTG--TTCTCTCCCTTGA-ACTCGACCTCAATGACTGGCTTT 24549 Query 518432 TTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--T 518489 || | ||| || || ||||| ||| |||||||| | |||| |||| | | Sbjct 24548 CCGGCACGGTCAATGACCTTGAATGGGAAGTGCTTCATATCGGCTTGA--ACTTCAGCAT 24491 Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG 518549 | || | | ||| || || || || ||||| || | || ||| |||| || || | Sbjct 24490 CTGCGAACTTGCGACCGATCAAACGCTTAGCATCGAAGACGGTGTTGATTGGGTTCATGG 24431 Query 518550 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 518609 | |||||| || || |||||||| |||| | || || ||||| || | ||| | | Sbjct 24430 CGACTTGATTCTTAGCGGCATCTCCGATCAAGCGCTCAGTATCTGTGAAGGCAACGAAGG 24371 Query 518610 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA 518669 |||| || || || || ||||| || || || |||||||| | | || ||| | | | Sbjct 24370 ATGGTGTGGTACGGTTTCCTTGGTCGTTGGCGATAATTTCGATTCTATCATCACGGAAGA 24311 Query 518670 CACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 ||| |||||| | || || || ||||| ||||||||| Sbjct 24310 TACCCACACAAGAGTAGGTAGTACCCAAATCGATACCAATA 24270 >seq4 Length=664028 Score = 120 bits (132), Expect = 2e-21 Identities = 148/201 (74%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| ||||| ||||||||| | | ||||||||||||||||| |||||||| | ||| Sbjct 322772 TTAAG-GGTAAGGAAGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTCTCT 322714 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 || ||||| || |||||| |||||||||| || |||| | || || ||||| |||| Sbjct 322713 GCCCGTACTGTCATTACTGGTGATCCCAATCTTTCTCTAGACGAGGTCGGTGTCCCTCGA 322654 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028 | ||||| | || || |||| | || | ||| ||| || |||||||| | || Sbjct 322653 AGCATTGCAAGAATCCTCACTTATCCGGAGACTGTTACACCACTGAATATTGATAAACTG 322594 Query 669029 ACTCAATTAGTGAAAAATGGT 669049 ||| | || ||||||||| Sbjct 322593 CATCAGCTTGTCAAAAATGGT 322573 >seq23 Length=365734 Score = 98.7 bits (108), Expect = 8e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | ||| || || | ||| ||||||||||| || || | || ||| | ||| || Sbjct 281173 TTCTCCAAACCGTAAGCGAGAGCGGCAGCAGTTGGCTCGTTGACAACTCTGAGAACGTTC 281232 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | ||| |||||| || ||||| ||||| ||||| | ||| |||||||| || ||||| Sbjct 281233 AAACCGGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGGGAATCGTTGAAGTATGCG 281292 Query 518288 GGAACAGTAATAACGGCAT 518306 ||||| |||| ||||||| Sbjct 281293 GGAACGGTAACGACGGCAT 281311 >seq54 Length=229993 Score = 91.5 bits (100), Expect = 1e-12 Identities = 205/306 (67%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 |||| ||||||| ||||||||| | || | || | ||||| | || ||| | | Sbjct 186324 TATCGAAATCTTGACCTCCCAAATGGGTGTCACCGGCAGTAGCCTTAACAGTGAAGACAC 186265 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 || ||| | | ||||| ||||| ||||||||||| | ||| | || || | Sbjct 186264 CACCTTGGATGTTAAGAAGAGAAACATCGAAAGTTCCACCACCGAGATCGTAGATGAGAA 186205 Query 518145 CATTCATTTCTTTGTCTTGGTTTTT-----ATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 | || |||||| |||| ||| | ||||||| || |||| |||||||| || Sbjct 186204 CGTTACGCTCTTTG--TTGGACTTTCCAGCACCAAGACCGTAAGCAATGGCAGCAGCGGT 186147 Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 || || || || || | | || || |||||||| || || ||||| || ||||| Sbjct 186146 AGGCTCGTTGATGATACGGAGGACGTTTAGACCAGCGATGGCACCAGCATCCTTGGTGGC 186087 Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318 ||| | ||| ||||| || || || |||||||| || ||||| | || | |||||| Sbjct 186086 TTGACGTTGGTTGTCGTTGAAGTAAGCTGGAACAGTGATGACGGCTTTTGTGACCTTCTT 186027 Query 518319 TACCAA 518324 |||| Sbjct 186026 GCCCAA 186021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780741861393838