Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq29 141 7e-28
seq4 120 2e-21
seq23 98.7 8e-15
seq54 91.5 1e-12
>seq29
Length=315494
Score = 141 bits (156), Expect = 7e-28
Identities = 455/701 (65%), Gaps = 10/701 (1%)
Strand=Plus/Minus
Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074
|||||||| || || || || ||||| ||||| | ||||| || | || | | | ||
Sbjct 24965 ACAAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTATCACCAGCGGTGGATTTGACC 24906
Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134
| || | || || || | | ||| |||| ||||| ||||| ||||| | |||
Sbjct 24905 TCAAAGATACCCTCCTCGATGGTCAAGAGAGAGACATCGAAAGTTCCTCCACCAAGATCG 24846
Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194
|| || || || || || || || || || | ||| || |||| |||||
Sbjct 24845 AAGATGAGAACGTTACGCTCACCCTCGATCTTCTTGTCCAAACCGTAAGCAATGGCAGCT 24786
Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254
|| || || ||||| || || | | ||| |||||||||||||| || || || ||
Sbjct 24785 GCGGTAGGCTCATTGATGATACGAAGAACGTTAAGACCAGCAATGAGACCAGCGTCCTTG 24726
Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314
|| ||||| | ||||||||| | || || || || || || | ||||| | | ||
Sbjct 24725 GTAGCTTGACGTTGTGAATCTGTGAAGTAAGCTGGGACTGTGACGACGGCGTTGTTAACA 24666
Query 518315 TCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATT 518374
| ||| | ||||| || || | | |||| || || ||||| || || |||
Sbjct 24665 GTTGCACCGAGGTAAGCCTCAGCGGTCTCTCTCATCTTGACCAAGATCATGGAAGAGATT 24606
Query 518375 TGTTCTGGGGAATATTGCTTGGATTCATT---TTGATATGATACTTCAAAATATGGTTTA 518431
| |||||| | |||| ||| ||| | |||| | || |||| ||| ||
Sbjct 24605 TCTTCTGGTGTGAATTGTTTG--TTCTCTCCCTTGA-ACTCGACCTCAATGACTGGCTTT 24549
Query 518432 TTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--T 518489
|| | ||| || || ||||| ||| |||||||| | |||| |||| | |
Sbjct 24548 CCGGCACGGTCAATGACCTTGAATGGGAAGTGCTTCATATCGGCTTGA--ACTTCAGCAT 24491
Query 518490 CATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG 518549
| || | | ||| || || || || ||||| || | || ||| |||| || || |
Sbjct 24490 CTGCGAACTTGCGACCGATCAAACGCTTAGCATCGAAGACGGTGTTGATTGGGTTCATGG 24431
Query 518550 CAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATG 518609
| |||||| || || |||||||| |||| | || || ||||| || | ||| | |
Sbjct 24430 CGACTTGATTCTTAGCGGCATCTCCGATCAAGCGCTCAGTATCTGTGAAGGCAACGAAGG 24371
Query 518610 ATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATA 518669
|||| || || || || ||||| || || || |||||||| | | || ||| | | |
Sbjct 24370 ATGGTGTGGTACGGTTTCCTTGGTCGTTGGCGATAATTTCGATTCTATCATCACGGAAGA 24311
Query 518670 CACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710
||| |||||| | || || || ||||| |||||||||
Sbjct 24310 TACCCACACAAGAGTAGGTAGTACCCAAATCGATACCAATA 24270
>seq4
Length=664028
Score = 120 bits (132), Expect = 2e-21
Identities = 148/201 (74%), Gaps = 1/201 (0%)
Strand=Plus/Minus
Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908
||||| ||||| ||||||||| | | ||||||||||||||||| |||||||| | |||
Sbjct 322772 TTAAG-GGTAAGGAAGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTCTCT 322714
Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968
|| ||||| || |||||| |||||||||| || |||| | || || ||||| ||||
Sbjct 322713 GCCCGTACTGTCATTACTGGTGATCCCAATCTTTCTCTAGACGAGGTCGGTGTCCCTCGA 322654
Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028
| ||||| | || || |||| | || | ||| ||| || |||||||| | ||
Sbjct 322653 AGCATTGCAAGAATCCTCACTTATCCGGAGACTGTTACACCACTGAATATTGATAAACTG 322594
Query 669029 ACTCAATTAGTGAAAAATGGT 669049
||| | || |||||||||
Sbjct 322593 CATCAGCTTGTCAAAAATGGT 322573
>seq23
Length=365734
Score = 98.7 bits (108), Expect = 8e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
|| || | ||| || || | ||| ||||||||||| || || | || ||| | ||| ||
Sbjct 281173 TTCTCCAAACCGTAAGCGAGAGCGGCAGCAGTTGGCTCGTTGACAACTCTGAGAACGTTC 281232
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
| ||| |||||| || ||||| ||||| ||||| | ||| |||||||| || |||||
Sbjct 281233 AAACCGGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGGGAATCGTTGAAGTATGCG 281292
Query 518288 GGAACAGTAATAACGGCAT 518306
||||| |||| |||||||
Sbjct 281293 GGAACGGTAACGACGGCAT 281311
>seq54
Length=229993
Score = 91.5 bits (100), Expect = 1e-12
Identities = 205/306 (67%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084
|||| ||||||| ||||||||| | || | || | ||||| | || ||| | |
Sbjct 186324 TATCGAAATCTTGACCTCCCAAATGGGTGTCACCGGCAGTAGCCTTAACAGTGAAGACAC 186265
Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144
|| ||| | | ||||| ||||| ||||||||||| | ||| | || || |
Sbjct 186264 CACCTTGGATGTTAAGAAGAGAAACATCGAAAGTTCCACCACCGAGATCGTAGATGAGAA 186205
Query 518145 CATTCATTTCTTTGTCTTGGTTTTT-----ATCAAGACCATACGCAAAAGCAGCAGCAGT 518199
| || |||||| |||| ||| | ||||||| || |||| |||||||| ||
Sbjct 186204 CGTTACGCTCTTTG--TTGGACTTTCCAGCACCAAGACCGTAAGCAATGGCAGCAGCGGT 186147
Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259
|| || || || || | | || || |||||||| || || ||||| || |||||
Sbjct 186146 AGGCTCGTTGATGATACGGAGGACGTTTAGACCAGCGATGGCACCAGCATCCTTGGTGGC 186087
Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTT 518318
||| | ||| ||||| || || || |||||||| || ||||| | || | ||||||
Sbjct 186086 TTGACGTTGGTTGTCGTTGAAGTAAGCTGGAACAGTGATGACGGCTTTTGTGACCTTCTT 186027
Query 518319 TACCAA 518324
||||
Sbjct 186026 GCCCAA 186021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780741861393838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |