Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq7 141 1e-28 >seq7 Length=635569 Score = 141 bits (156), Expect = 1e-28 Identities = 272/393 (69%), Gaps = 11/393 (3%) Strand=Plus/Minus Query 154719 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATG 154778 || ||||| |||| || || ||||| || |||||||| |||| |||||||| ||| Sbjct 497623 TGCTTGATCCCAGTCTCTGCCCATGGTACCAATCCTGCATCAGCTGCTATGGCAGGTATG 497564 Query 154779 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGTAACATAGACATCAAAGATCT-AGA 154834 ||||| ||| || ||||| | | | |||||| | ||||| |||||| | | Sbjct 497563 CGTGTTGTTACTGTAAAATGTGACATCAAGTCTGGTAATCTCGACATGGCAGATCTCAAA 497504 Query 154835 GAAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATACCCATCT 154892 | | || | | | |||| | ||||| ||||||||| ||||||||| | Sbjct 497503 GCAAAATG---TGAGAAATATAGCGAGGAACTTGGCGCTATTATGATCACATACCCAAGT 497447 Query 154893 ACACATGGTGTATTTGAAACTAACATTA-GACAGATATGTAAGATCGTTCATGACAATGG 154951 ||| ||| || || ||| | | || | | | | |||| | || |||||| | |||| Sbjct 497446 ACATTTGGGGTGTTCGAACCAGAGATCAAGGCTGC-ATGTGATATTGTTCATCAACATGG 497388 Query 154952 TGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG 155011 |||||| || ||| | || || || || | ||||| || | ||| || ||| | Sbjct 497387 TGGTCAAGTTTATATGGACGGCGCTAACATGAATGCTCAAATCGGATTATGTTCACCTGG 497328 Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071 ||| |||||| |||||||| ||||| ||| | || || ||||| |||||||| ||||| Sbjct 497327 TGAAATTGGTGCCGATGTATGCCATCTTAACCTTCACAAGACATTTTGTATTCCTCATGG 497268 Query 155072 AGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||| |||||||| || ||||| || ||||| Sbjct 497267 AGGTGGTGGTCCTGGTGTTGGTCCAATTGGTGT 497235 Score = 138 bits (152), Expect = 1e-27 Identities = 199/281 (71%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||||||| | || | | ||| | ||||| |||| | || ||||| ||||| ||| Sbjct 498661 GATATTGCTTTTGGAAATGCTCAACGTTTTGGAGTTCCATTTGGTTATGGTGGTCCACAT 498602 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 ||||| ||||| || | ||||| || ||||||||||| ||||| | | | ||| Sbjct 498601 GCTGCCTTCTTCGCTGTTAGTGACAAATACAAGAGAAAGATTCCTGGTCGTCTCATTGGT 498542 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 || ||||| ||| |||||||| ||||| || | || |||||||| ||| Sbjct 498541 GTATCGAAGGATAGACTAGGGGATAAAGCAATGAGATTGGCTTTGCAAACTAGAGAACAG 498482 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 |||||| | ||||| || || || ||||| | ||||| ||||||||| | |||| || Sbjct 498481 CATATCCGCAGAGAAAAGGCTACTAGTAATGTATGCACGGCTCAGGCATTATTGGCCAAC 498422 Query 153987 ATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACT 154027 ||| || |||||||||| || ||||| | || ||||| Sbjct 498421 ATGAGTGCTTTCTATGCAGTCTACCATGGGCCTGAAGGACT 498381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579201049220320