Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 1e-28
>seq7
Length=635569
Score = 141 bits (156), Expect = 1e-28
Identities = 272/393 (69%), Gaps = 11/393 (3%)
Strand=Plus/Minus
Query 154719 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATG 154778
|| ||||| |||| || || ||||| || |||||||| |||| |||||||| |||
Sbjct 497623 TGCTTGATCCCAGTCTCTGCCCATGGTACCAATCCTGCATCAGCTGCTATGGCAGGTATG 497564
Query 154779 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGTAACATAGACATCAAAGATCT-AGA 154834
||||| ||| || ||||| | | | |||||| | ||||| |||||| | |
Sbjct 497563 CGTGTTGTTACTGTAAAATGTGACATCAAGTCTGGTAATCTCGACATGGCAGATCTCAAA 497504
Query 154835 GAAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATACCCATCT 154892
| | || | | | |||| | ||||| ||||||||| ||||||||| |
Sbjct 497503 GCAAAATG---TGAGAAATATAGCGAGGAACTTGGCGCTATTATGATCACATACCCAAGT 497447
Query 154893 ACACATGGTGTATTTGAAACTAACATTA-GACAGATATGTAAGATCGTTCATGACAATGG 154951
||| ||| || || ||| | | || | | | | |||| | || |||||| | ||||
Sbjct 497446 ACATTTGGGGTGTTCGAACCAGAGATCAAGGCTGC-ATGTGATATTGTTCATCAACATGG 497388
Query 154952 TGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG 155011
|||||| || ||| | || || || || | ||||| || | ||| || ||| |
Sbjct 497387 TGGTCAAGTTTATATGGACGGCGCTAACATGAATGCTCAAATCGGATTATGTTCACCTGG 497328
Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071
||| |||||| |||||||| ||||| ||| | || || ||||| |||||||| |||||
Sbjct 497327 TGAAATTGGTGCCGATGTATGCCATCTTAACCTTCACAAGACATTTTGTATTCCTCATGG 497268
Query 155072 AGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||| |||||||| || ||||| || |||||
Sbjct 497267 AGGTGGTGGTCCTGGTGTTGGTCCAATTGGTGT 497235
Score = 138 bits (152), Expect = 1e-27
Identities = 199/281 (71%), Gaps = 0/281 (0%)
Strand=Plus/Minus
Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806
||||||||| | || | | ||| | ||||| |||| | || ||||| ||||| |||
Sbjct 498661 GATATTGCTTTTGGAAATGCTCAACGTTTTGGAGTTCCATTTGGTTATGGTGGTCCACAT 498602
Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866
||||| ||||| || | ||||| || ||||||||||| ||||| | | | |||
Sbjct 498601 GCTGCCTTCTTCGCTGTTAGTGACAAATACAAGAGAAAGATTCCTGGTCGTCTCATTGGT 498542
Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926
|| ||||| ||| |||||||| ||||| || | || |||||||| |||
Sbjct 498541 GTATCGAAGGATAGACTAGGGGATAAAGCAATGAGATTGGCTTTGCAAACTAGAGAACAG 498482
Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
|||||| | ||||| || || || ||||| | ||||| ||||||||| | |||| ||
Sbjct 498481 CATATCCGCAGAGAAAAGGCTACTAGTAATGTATGCACGGCTCAGGCATTATTGGCCAAC 498422
Query 153987 ATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACT 154027
||| || |||||||||| || ||||| | || |||||
Sbjct 498421 ATGAGTGCTTTCTATGCAGTCTACCATGGGCCTGAAGGACT 498381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579201049220320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |