Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq158 140 7e-28 seq29 138 3e-27 seq81 86.0 1e-11 >seq158 Length=74113 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||||||||| ||||| ||||| || |||||||||| ||| || | |||||| Sbjct 63145 AACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCT 63204 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || || ||||| || |||||||| | ||| ||||| || || ||||| || || ||||| Sbjct 63205 TCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCC 63264 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || |||||| || || |||||||||||| || || || ||||| | || Sbjct 63265 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 63324 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 63325 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356 >seq29 Length=315494 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 194950 TCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAG 195009 || ||||||||||||||||| | ||| ||||| || || || | |||||| ||||| || Sbjct 102490 TCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAA 102549 Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069 || | ||||||||| || || |||||||| || ||||| ||||| ||| || || || Sbjct 102550 ATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTA 102609 Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| || || ||||||||| | |||| ||||| || || || || || || Sbjct 102610 TCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACA 102669 Query 195130 AACACTTGCAT 195140 || | |||||| Sbjct 102670 AAGATTTGCAT 102680 Score = 100 bits (110), Expect = 6e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || ||||||||||| || || || || || || | ||| | |||||||| Sbjct 103210 AACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCTTC 103269 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| || || || ||||| || | || |||||||| |||||||| || || ||||| || Sbjct 103270 GAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTG 103329 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || || || |||||||| | || || || ||||||| ||||| Sbjct 103330 GATCTTGGACTTAACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTCTT 103389 Query 195111 TCCTGTCA 195118 || |||| Sbjct 103390 GCCGGTCA 103397 >seq81 Length=155533 Score = 86.0 bits (94), Expect = 1e-11 Identities = 185/274 (68%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||||||| | |||| | | ||||| ||||||||| | || || | |||||||||||| Sbjct 111847 TTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAATGGGGATTGG 111788 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || | || ||||| ||| || || | | ||||||||||| ||||||||| Sbjct 111787 ACTCTCATGTGCCCCAACGAATGTCCAGGTTTGGCAGATGTTTATGGCGAGGAGTTCGAG 111728 Query 160709 ACTCTTTATGAAAGATACGAAAAAG-AGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767 |||| || || | ||||| || | ||| ||| | | ||| | ||||| ||| | Sbjct 111727 GCTCTCTACGAGGGCTACGAGAAGGCAGGCAAGGGTC-GCAAGACTATCAAGGCTCAAAA 111669 Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827 || ||| | || |||| || ||| |||| || | || || || ||||| Sbjct 111668 GCTTTGGTACTCGATTCTTGAGGCACAAACCGAGACCGGAAATCCTTTCATGCTTTACAA 111609 Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 |||||| | ||||||||||| |||||| Sbjct 111608 GGATGCATGCAACAAGAAGAGTAACCAAAAGAAC 111575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109458528676841