Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq158 140 7e-28
seq29 138 3e-27
seq81 86.0 1e-11
>seq158
Length=74113
Score = 140 bits (154), Expect = 7e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988
|| || | ||||||||| ||||| ||||| || |||||||||| ||| || | ||||||
Sbjct 63145 AACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCT 63204
Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|| || ||||| || |||||||| | ||| ||||| || || ||||| || || |||||
Sbjct 63205 TCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCC 63264
Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || || |||||| || || |||||||||||| || || || ||||| | ||
Sbjct 63265 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 63324
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | || || ||||| | |||||
Sbjct 63325 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356
>seq29
Length=315494
Score = 138 bits (152), Expect = 3e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 194950 TCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAG 195009
|| ||||||||||||||||| | ||| ||||| || || || | |||||| ||||| ||
Sbjct 102490 TCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAA 102549
Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069
|| | ||||||||| || || |||||||| || ||||| ||||| ||| || || ||
Sbjct 102550 ATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTA 102609
Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|||||||| || || ||||||||| | |||| ||||| || || || || || ||
Sbjct 102610 TCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACA 102669
Query 195130 AACACTTGCAT 195140
|| | ||||||
Sbjct 102670 AAGATTTGCAT 102680
Score = 100 bits (110), Expect = 6e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || || ||||||||||| || || || || || || | ||| | ||||||||
Sbjct 103210 AACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAAAGTGCGACCATCTTC 103269
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||| || || || ||||| || | || |||||||| |||||||| || || ||||| ||
Sbjct 103270 GAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTG 103329
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||| || || || |||||||| | || || || ||||||| |||||
Sbjct 103330 GATCTTGGACTTAACATTGTCGATGGTGTCGCTAGACTCAACCTCGAGGGTAATAGTCTT 103389
Query 195111 TCCTGTCA 195118
|| ||||
Sbjct 103390 GCCGGTCA 103397
>seq81
Length=155533
Score = 86.0 bits (94), Expect = 1e-11
Identities = 185/274 (68%), Gaps = 2/274 (1%)
Strand=Plus/Minus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
||||||||| | |||| | | ||||| ||||||||| | || || | ||||||||||||
Sbjct 111847 TTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAATGGGGATTGG 111788
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| || | || ||||| ||| || || | | ||||||||||| |||||||||
Sbjct 111787 ACTCTCATGTGCCCCAACGAATGTCCAGGTTTGGCAGATGTTTATGGCGAGGAGTTCGAG 111728
Query 160709 ACTCTTTATGAAAGATACGAAAAAG-AGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767
|||| || || | ||||| || | ||| ||| | | ||| | ||||| ||| |
Sbjct 111727 GCTCTCTACGAGGGCTACGAGAAGGCAGGCAAGGGTC-GCAAGACTATCAAGGCTCAAAA 111669
Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827
|| ||| | || |||| || ||| |||| || | || || || |||||
Sbjct 111668 GCTTTGGTACTCGATTCTTGAGGCACAAACCGAGACCGGAAATCCTTTCATGCTTTACAA 111609
Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861
|||||| | ||||||||||| ||||||
Sbjct 111608 GGATGCATGCAACAAGAAGAGTAACCAAAAGAAC 111575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109458528676841
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |