Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq81 174 2e-38 >seq81 Length=155533 Score = 174 bits (192), Expect = 2e-38 Identities = 508/779 (65%), Gaps = 6/779 (1%) Strand=Plus/Plus Query 47961 ATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAA 48020 |||||||||| || | || ||| | ||||| ||||| |||||||||||||| ||| Sbjct 111564 ATAGTACCCAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAA 111623 Query 48021 GGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATA 48080 || |||| || || | || | |||| || || | ||||| | |||||| ||| Sbjct 111624 GGATTTCCGGTCTCGGTTTGTGCCTCAAGAATCGAGTACCAAAGCTTTTGAGCCTTGATA 111683 Query 48081 ACAGCTCTAGCTTTATTATCATGTTCGTATT--TAGTATATAACTTCTCAAATTCATCCC 48138 | | | || | | ||||| | ||| | | | ||| || || || | Sbjct 111684 GTCTTGCGACCCTTGCCTGCCTTCTCGTAGCCCTCGTAGAGAGC--CTCGAACTCCTCGC 111741 Query 48139 CATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCAT 48198 |||| |||| | || || |||||||| || || ||||| | | ||||||| ||| | Sbjct 111742 CATAAACATCTGCCAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCT 111801 Query 48199 TTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTC 48258 ||| || | |||| |||| ||| || ||||| | || || | ||| | | | Sbjct 111802 TTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCAC 111861 Query 48259 TTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCC 48318 | |||||| || ||| |||| | || ||||| || || | | ||| ||||||| Sbjct 111862 GAACTTCTTCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCC 111921 Query 48319 ATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATC 48378 ||||||| | || | || | |||| || || || ||||| |||||||| | ||||| Sbjct 111922 ATGGTTCCAGGTAAACAGCAAAGGCACCAGGACGCTTGTTACCACCTTGATCAACATATC 111981 Query 48379 TGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTC 48438 ||||||| ||||| |||||| | ||| || |||||||| || || | |||||||| | Sbjct 111982 TGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAATTTCCATTGGTAC 112041 Query 48439 CCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCA 48498 | | ||| || ||| | || | || | ||| | ||| |||||||| || Sbjct 112042 CGGCAATGTATGCACCAGTGGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCAT 112101 Query 48499 TTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTA 48558 | || || || | |||||| || | ||||| ||||| || || ||||| || || Sbjct 112102 TCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCT 112161 Query 48559 TCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATG 48618 |||| | | || || || || | ||| | || ||| || | || | || Sbjct 112162 TCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTG 112221 Query 48619 TTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAAT 48678 |||| || ||||| | || | || | ||| | ||| || |||||||| ||| || | Sbjct 112222 TTGGCGAAGCATGTGTGAAGTACTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCT 112281 Query 48679 CTATATC-CCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736 | ||||| || | || ||||| | | |||||||| | ||| | ||| || | ||| Sbjct 112282 CGATATCATCACCG-TGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTC 112339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562097396217720